STRINGSTRING
SVI_0044 SVI_0044 SVI_0081 SVI_0081 SVI_0148 SVI_0148 SVI_0150 SVI_0150 SVI_0334 SVI_0334 SVI_0400 SVI_0400 SVI_0401 SVI_0401 SVI_0447 SVI_0447 SVI_0448 SVI_0448 SVI_0997 SVI_0997 SVI_1015 SVI_1015 SVI_1016 SVI_1016 SVI_1017 SVI_1017 SVI_1018 SVI_1018 SVI_1019 SVI_1019 SVI_1020 SVI_1020 SVI_1021 SVI_1021 SVI_1036 SVI_1036 gluP-1 gluP-1 SVI_1133 SVI_1133 SVI_1518 SVI_1518 SVI_1519 SVI_1519 SVI_1521 SVI_1521 SVI_1522 SVI_1522 gluP-2 gluP-2 SVI_1600 SVI_1600 SVI_1627 SVI_1627 SVI_1628 SVI_1628 SVI_1629 SVI_1629 SVI_1776 SVI_1776 SVI_1794 SVI_1794 SVI_2018 SVI_2018 SVI_2053 SVI_2053 SVI_2278 SVI_2278 SVI_2322 SVI_2322 SVI_2473 SVI_2473 SVI_2634 SVI_2634 SVI_2816 SVI_2816 SVI_2970 SVI_2970 SVI_3084 SVI_3084 SVI_3303 SVI_3303 SVI_3437 SVI_3437 blaI blaI SVI_3474 SVI_3474 SVI_3546 SVI_3546 SVI_3590 SVI_3590 SVI_3599 SVI_3599 SVI_3655 SVI_3655 SVI_3729 SVI_3729 SVI_3824 SVI_3824 SVI_3898 SVI_3898 SVI_3974 SVI_3974 SVI_4063 SVI_4063 SVI_4208 SVI_4208 SVI_4318 SVI_4318
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SVI_0044Amidohydrolase family protein. (1079 aa)
SVI_0081Conserved hypothetical protein. (606 aa)
SVI_0148Efflux pump component MtrF. (528 aa)
SVI_0150Aculeacin A acylase, putative. (794 aa)
SVI_0334Conserved hypothetical protein. (293 aa)
SVI_0400Conserved hypothetical protein. (241 aa)
SVI_0401Conserved hypothetical protein. (387 aa)
SVI_0447Oar-like protein. (970 aa)
SVI_0448Conserved hypothetical protein. (739 aa)
SVI_0997Peptidase, M28D family. (467 aa)
SVI_1015Transcriptional regulator, LacI family. (337 aa)
SVI_1016Hypothetical protein. (37 aa)
SVI_1017Hypothetical protein. (39 aa)
SVI_1018TonB-dependent receptor. (885 aa)
SVI_1019Tryptophan halogenase, putative. (510 aa)
SVI_1020SapC-related protein. (237 aa)
SVI_1021Hypothetical protein. (236 aa)
SVI_1036Conserved hypothetical protein. (614 aa)
gluP-1Glucose/galactose transporter. (434 aa)
SVI_1133Prolyl oligopeptidase family protein. (788 aa)
SVI_1518Tryptophan halogenase, putative. (504 aa)
SVI_1519Tryptophan halogenase, putative. (513 aa)
SVI_1521Transcriptional regulator, LacI family. (332 aa)
SVI_1522Sodium:galactoside symporter family protein. (515 aa)
gluP-2Glucose/galactose transporter. (428 aa)
SVI_1600TonB-dependent receptor. (887 aa)
SVI_1627TonB-dependent receptor. (926 aa)
SVI_1628Hypothetical protein. (71 aa)
SVI_1629Hypothetical protein. (34 aa)
SVI_1776Peptidase, M28 family. (564 aa)
SVI_1794Conserved hypothetical protein. (380 aa)
SVI_2018Prolyl oligopeptidase family protein. (674 aa)
SVI_2053Lipoprotein, putative. (589 aa)
SVI_2278TonB-dependent receptor. (944 aa)
SVI_2322Zinc-dependent metallopeptidase. (612 aa)
SVI_2473Conserved hypothetical protein. (276 aa)
SVI_2634Prolyl oligopeptidase family protein. (646 aa)
SVI_2816Hypothetical protein. (153 aa)
SVI_2970TonB-dependent receptor. (973 aa)
SVI_3084TonB-dependent receptor. (953 aa)
SVI_3303Conserved hypothetical protein. (219 aa)
SVI_3437TonB-dependent receptor. (850 aa)
blaIPenicillinase repressor. (160 aa)
SVI_3474TonB-like protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. (424 aa)
SVI_3546TonB-dependent receptor. (863 aa)
SVI_3590Hypothetical protein. (733 aa)
SVI_3599Dipeptidyl peptidase IV. (754 aa)
SVI_3655Conserved hypothetical protein; Catalyzes the removal of dipeptides from the N-terminus of oligopeptides. (718 aa)
SVI_3729Peptidase, M28 family. (342 aa)
SVI_3824TonB-dependent receptor. (901 aa)
SVI_3898Prolyl oligopeptidase family protein. (657 aa)
SVI_3974Conserved hypothetical protein. (200 aa)
SVI_4063Prolyl oligopeptidase family protein. (654 aa)
SVI_4208Zinc carboxypeptidase family protein. (615 aa)
SVI_4318TonB-dependent receptor. (899 aa)
Your Current Organism:
Shewanella violacea
NCBI taxonomy Id: 637905
Other names: S. violacea DSS12, Shewanella violacea DSS12, Shewanella violacea JCM 10179, Shewanella violacea str. DSS12, Shewanella violacea strain DSS12
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