STRINGSTRING
SVI_0944 SVI_0944 SVI_0945 SVI_0945 SVI_0946 SVI_0946 SVI_3378 SVI_3378 SVI_3379 SVI_3379
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SVI_0944Toxin secretion ATP-binding protein. (769 aa)
SVI_0945HlyD family secretion protein. (469 aa)
SVI_0946RTX toxin, putative. (2267 aa)
SVI_3378HlyD family secretion protein. (473 aa)
SVI_3379Toxin secretion ABC transporter protein, HlyB family. (746 aa)
Your Current Organism:
Shewanella violacea
NCBI taxonomy Id: 637905
Other names: S. violacea DSS12, Shewanella violacea DSS12, Shewanella violacea JCM 10179, Shewanella violacea str. DSS12, Shewanella violacea strain DSS12
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.