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pomA pomA pomB pomB SVI_1407 SVI_1407 flgB flgB flgC flgC flgD flgD flgE-1 flgE-1 flgE-2 flgE-2 flgF flgF flgG flgG flgH flgH flgI flgI flgJ flgJ SVI_1420 SVI_1420 flgL flgL SVI_1422 SVI_1422 SVI_1423 SVI_1423 flaG flaG fliD fliD fliS fliS fliE fliE fliF fliF fliG fliG fliH fliH fliI fliI fliJ fliJ fliK fliK fliL fliL fliM fliM fliN fliN fliO fliO fliP fliP fliQ fliQ fliR fliR flhB flhB flhA flhA SVI_1986 SVI_1986 SVI_4258 SVI_4258
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
pomAChemotaxis pomA protein. (255 aa)
pomBSodium-driven polar flagellar protein PomB. (325 aa)
SVI_1407Flagellar basal-body P-ring formation protein FlgA, putative; Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P- ring assembly; Belongs to the FlgA family. (234 aa)
flgBFlagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body. (132 aa)
flgCFlagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family. (138 aa)
flgDBasal-body rod modification protein FlgD; Required for flagellar hook formation. May act as a scaffolding protein. (235 aa)
flgE-1Flagellar hook protein FlgE. (454 aa)
flgE-2Flagellar hook protein FlgE. (453 aa)
flgFFlagellar basal-body rod protein FlgF; Belongs to the flagella basal body rod proteins family. (247 aa)
flgGFlagellar basal-body rod protein FlgG; Belongs to the flagella basal body rod proteins family. (262 aa)
flgHFlagellar L-ring protein FlgH; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation. (228 aa)
flgIFlagellar P-ring protein FlgI; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation. (363 aa)
flgJFlagellar protein FlgJ. (305 aa)
SVI_1420Flagellar hook-associated protein FlgK, putative; Belongs to the flagella basal body rod proteins family. (638 aa)
flgLFlagellar hook-associated protein FlgL. (404 aa)
SVI_1422Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. (482 aa)
SVI_1423Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. (481 aa)
flaGFlagellin FlaG. (128 aa)
fliDFlagellar hook-associated protein FliD; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. (453 aa)
fliSFlagellar protein FliS. (136 aa)
fliEFlagellar hook-basal body complex protein FliE. (114 aa)
fliFFlagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family. (571 aa)
fliGFlagellar motor switch protein FliG; FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. (345 aa)
fliHFlagellar assembly protein FliH. (356 aa)
fliIFlagellum-specific ATP synthase FliI. (446 aa)
fliJFlagellar protein FliJ. (149 aa)
fliKFlagellar hook-length control protein FliK. (576 aa)
fliLFlagellar protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family. (173 aa)
fliMFlagellar motor switch protein FliM; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. (343 aa)
fliNFlagellar motor switch protein FliN; FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. Belongs to the FliN/MopA/SpaO family. (127 aa)
fliOFlagellar protein FliO. (123 aa)
fliPFlagellar biosynthetic protein FliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family. (248 aa)
fliQFlagellar biosynthetic protein FliQ; Role in flagellar biosynthesis. Belongs to the FliQ/MopD/SpaQ family. (89 aa)
fliRFlagellar biosynthetic protein FliR; Role in flagellar biosynthesis. Belongs to the FliR/MopE/SpaR family. (265 aa)
flhBFlagellar biosynthetic protein FlhB; Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the type III secretion exporter family. (377 aa)
flhAFlagellar biosynthesis protein FlhA; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family. (699 aa)
SVI_1986Flagellin, putative; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. (232 aa)
SVI_4258Flagellar protein FliL, putative; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family. (140 aa)
Your Current Organism:
Shewanella violacea
NCBI taxonomy Id: 637905
Other names: S. violacea DSS12, Shewanella violacea DSS12, Shewanella violacea JCM 10179, Shewanella violacea str. DSS12, Shewanella violacea strain DSS12
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