STRINGSTRING
cpxA cpxA cpxR cpxR SVI_0406 SVI_0406 SVI_0407 SVI_0407 torS torS torT torT torR torR
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
cpxASensor protein CpxA. (460 aa)
cpxRTranscriptional regulatory protein CpxR. (227 aa)
SVI_0406Sensor histidine kinase. (429 aa)
SVI_0407DNA-binding response regulator. (235 aa)
torSSensor histidine kinase/response regulator TorS. (1019 aa)
torTPeriplasmic protein TorT. (379 aa)
torRtorCAD operon transcriptional regulatory protein TorR. (244 aa)
Your Current Organism:
Shewanella violacea
NCBI taxonomy Id: 637905
Other names: S. violacea DSS12, Shewanella violacea DSS12, Shewanella violacea JCM 10179, Shewanella violacea str. DSS12, Shewanella violacea strain DSS12
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