STRINGSTRING
SVI_1319 SVI_1319 SVI_1949 SVI_1949 SVI_2051 SVI_2051 SVI_2136 SVI_2136 SVI_2226 SVI_2226 SVI_2417 SVI_2417 SVI_2496 SVI_2496 SVI_2611 SVI_2611 SVI_2940 SVI_2940 SVI_3646 SVI_3646 SVI_3998 SVI_3998 SVI_4209 SVI_4209
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SVI_1319Conserved hypothetical protein. (240 aa)
SVI_1949Conserved hypothetical protein. (251 aa)
SVI_2051Hypothetical protein. (238 aa)
SVI_2136Conserved hypothetical protein. (278 aa)
SVI_2226Extracellular solute-binding protein, family 3. (257 aa)
SVI_2417Extracellular solute-binding protein, family 3. (232 aa)
SVI_2496Extracellular solute-binding protein, family 3. (258 aa)
SVI_2611Conserved hypothetical protein. (244 aa)
SVI_2940Extracellular solute-binding protein, family 3. (237 aa)
SVI_3646Extracellular solute-binding protein, family 3. (271 aa)
SVI_3998Hypothetical protein. (253 aa)
SVI_4209Hypothetical protein. (290 aa)
Your Current Organism:
Shewanella violacea
NCBI taxonomy Id: 637905
Other names: S. violacea DSS12, Shewanella violacea DSS12, Shewanella violacea JCM 10179, Shewanella violacea str. DSS12, Shewanella violacea strain DSS12
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