STRINGSTRING
SVI_1034 SVI_1034 SVI_1086 SVI_1086 SVI_3879 SVI_3879 SVI_3725 SVI_3725 SVI_3723 SVI_3723 SVI_3010 SVI_3010 SVI_3009 SVI_3009 SVI_2691 SVI_2691 csgG csgG SVI_2274 SVI_2274 SVI_2162 SVI_2162 SVI_1561 SVI_1561 SVI_1403 SVI_1403 SVI_1377 SVI_1377 SVI_1361 SVI_1361 SVI_1340 SVI_1340 SVI_1251 SVI_1251 SVI_1223 SVI_1223 SVI_0015 SVI_0015 SVI_0532 SVI_0532
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SVI_1034Conserved hypothetical protein. (278 aa)
SVI_1086GGDEF domain protein. (555 aa)
SVI_3879Endoribonuclease L-PSP, putative. (117 aa)
SVI_3725Curli production assembly/transport component CsgE, putative. (131 aa)
SVI_3723Curli production assembly/transport component CsgG, putative. (259 aa)
SVI_3010Conserved hypothetical protein. (409 aa)
SVI_3009GAF/GGDEF domain protein. (328 aa)
SVI_2691Curli production assembly/transport component CsgE, putative. (146 aa)
csgGCurli production assembly/transport component CsgG. (251 aa)
SVI_2274Hypothetical protein. (611 aa)
SVI_2162Universal stress protein family. (310 aa)
SVI_1561Glycosyl transferase, group 1 family protein. (415 aa)
SVI_1403Conserved hypothetical protein. (209 aa)
SVI_1377Conserved hypothetical protein. (206 aa)
SVI_1361GGDEF domain protein. (407 aa)
SVI_1340DNA-binding protein, putative. (62 aa)
SVI_1251GGDEF domain protein. (294 aa)
SVI_1223Conserved hypothetical protein. (105 aa)
SVI_0015Conserved hypothetical protein; Antitoxin component of a type II toxin-antitoxin (TA) system. (83 aa)
SVI_0532Conserved hypothetical protein. (226 aa)
Your Current Organism:
Shewanella violacea
NCBI taxonomy Id: 637905
Other names: S. violacea DSS12, Shewanella violacea DSS12, Shewanella violacea JCM 10179, Shewanella violacea str. DSS12, Shewanella violacea strain DSS12
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