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tatC tatC SVI_1514 SVI_1514 SVI_1557 SVI_1557 nuoH nuoH nuoG nuoG nuoF nuoF nuoE nuoE nuoCD nuoCD nuoA nuoA SVI_1739 SVI_1739 SVI_1794 SVI_1794 SVI_1853 SVI_1853 SVI_2101 SVI_2101 ccoN ccoN SVI_2529 SVI_2529 SVI_2690 SVI_2690 SVI_2691 SVI_2691 SVI_2713 SVI_2713 sdhC sdhC SVI_2887 SVI_2887 SVI_2935 SVI_2935 SVI_2971 SVI_2971 sapA sapA SVI_3026 SVI_3026 SVI_3027 SVI_3027 SVI_3028 SVI_3028 ompK ompK SVI_3443 SVI_3443 SVI_3472 SVI_3472 SVI_3610 SVI_3610 SVI_3613 SVI_3613 SVI_3629 SVI_3629 SVI_3630 SVI_3630 SVI_3680 SVI_3680 SVI_3692 SVI_3692 SVI_3701 SVI_3701 SVI_3724 SVI_3724 SVI_3725 SVI_3725 SVI_3763 SVI_3763 tatA tatA tatB tatB SVI_3897 SVI_3897 SVI_3915 SVI_3915 SVI_4241 SVI_4241 SVI_4291 SVI_4291 atpC atpC atpD atpD atpG atpG atpA atpA atpH atpH atpF atpF SVI_1396 SVI_1396 smpA smpA SVI_1149 SVI_1149 SVI_1062 SVI_1062 SVI_1046 SVI_1046 SVI_0840 SVI_0840 SVI_0839 SVI_0839 SVI_0780 SVI_0780 kpsD kpsD kpsM kpsM SVI_0591 SVI_0591 SVI_0534 SVI_0534 petB petB SVI_0423 SVI_0423 SVI_0415 SVI_0415 SVI_0344 SVI_0344 SVI_0314 SVI_0314 SVI_0313 SVI_0313 SVI_0311 SVI_0311 SVI_1466 SVI_1466 atpE atpE atpB atpB
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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tatCSec-independent periplasmic protein translocation protein TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides. (249 aa)
SVI_1514Phosphate ABC transporter, periplasmic phosphate-binding protein, putative. (292 aa)
SVI_1557Polysaccharide export protein, putative. (370 aa)
nuoHNADH dehydrogenase I, H subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone. (318 aa)
nuoGNADH dehydrogenase I, G subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. Belongs to the complex I 75 kDa subunit family. (976 aa)
nuoFNADH dehydrogenase I, F subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family. (456 aa)
nuoENADH dehydrogenase I, E subunit. (228 aa)
nuoCDNADH dehydrogenase I, C/D subunits; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; In the C-terminal section; belongs to the complex I 49 kDa subunit family. (596 aa)
nuoANADH dehydrogenase I, A subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. (123 aa)
SVI_1739Phosphate ABC transporter, periplasmic phosphate-binding protein, putative. (306 aa)
SVI_1794Conserved hypothetical protein. (380 aa)
SVI_1853Conserved hypothetical protein. (682 aa)
SVI_2101Conserved hypothetical protein. (289 aa)
ccoNCytochrome c oxidase, cbb3-type, subunit I; Belongs to the heme-copper respiratory oxidase family. (474 aa)
SVI_2529ABC transporter, ATP-binding protein. (299 aa)
SVI_2690Curli production assembly/transport component CsgF, putative. (136 aa)
SVI_2691Curli production assembly/transport component CsgE, putative. (146 aa)
SVI_2713Nitrate reductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. (723 aa)
sdhCSuccinate dehydrogenase, cytochrome b556 subunit. (124 aa)
SVI_2887Hypothetical protein. (299 aa)
SVI_2935OmpA family protein; Belongs to the outer membrane OOP (TC 1.B.6) superfamily. (335 aa)
SVI_2971Outer membrane porin, putative. (401 aa)
sapAPeptide ABC transporter, periplasmic peptide-binding protein. (546 aa)
SVI_3026Iron-compound ABC transporter, ATP-binding protein, putative. (287 aa)
SVI_3027Iron-compound ABC transporter, ATP-binding protein. (317 aa)
SVI_3028Iron (chelated) ABC transporter, permease protein. (305 aa)
ompKOuter membrane protein OmpK. (264 aa)
SVI_3443Phosphate-selective porin O and P family. (446 aa)
SVI_3472TonB-dependent receptor. (667 aa)
SVI_3610Conserved hypothetical protein. (395 aa)
SVI_3613Outer membrane porin, putative. (402 aa)
SVI_3629ABC transporter, permease protein. (256 aa)
SVI_3630ABC transporter, ATP-binding protein. (329 aa)
SVI_3680Hypothetical protein. (450 aa)
SVI_3692Hypothetical protein. (376 aa)
SVI_3701Outer membrane porin, putative. (346 aa)
SVI_3724Curli production assembly/transport component CsgF, putative. (133 aa)
SVI_3725Curli production assembly/transport component CsgE, putative. (131 aa)
SVI_3763LamB porin family protein. (434 aa)
tatASec-independent protein translocase protein TatA; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. (79 aa)
tatBSec-independent protein translocase protein TatB; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation. (135 aa)
SVI_3897Conserved hypothetical protein. (343 aa)
SVI_3915Glycine betaine ABC transporter, substrate-binding protein. (313 aa)
SVI_4241Molybdenum ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily. (368 aa)
SVI_4291ABC transporter, ATP-binding protein. (285 aa)
atpCATP synthase F1, epsilon subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. (142 aa)
atpDATP synthase F1, beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family. (458 aa)
atpGATP synthase F1, gamma subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex. (286 aa)
atpAATP synthase F1, alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. Belongs to the ATPase alpha/beta chains family. (513 aa)
atpHATP synthase F1, delta subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation; Belongs to the ATPase delta chain family. (177 aa)
atpFATP synthase F0, B subunit; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family. (156 aa)
SVI_1396Hypothetical protein. (273 aa)
smpASmall protein A; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. (185 aa)
SVI_1149Outer membrane porin, putative. (319 aa)
SVI_1062Conserved hypothetical protein. (268 aa)
SVI_1046Conserved hypothetical protein. (367 aa)
SVI_0840Conserved hypothetical protein. (352 aa)
SVI_0839Conserved hypothetical protein. (370 aa)
SVI_0780iron(III) ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily. (342 aa)
kpsDPolysialic acid transport protein KpsD. (553 aa)
kpsMPolysialic acid transport protein KpsM. (259 aa)
SVI_0591Conserved hypothetical protein. (461 aa)
SVI_0534Voltage-gated potassium channel family. (268 aa)
petBUbiquinol-cytochrome c reductase, cytochrome b; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. (404 aa)
SVI_0423Conserved hypothetical protein. (258 aa)
SVI_0415ABC transporter, ATP-binding protein. (240 aa)
SVI_0344ABC 3 transport family protein. (245 aa)
SVI_0314Conserved hypothetical protein. (388 aa)
SVI_0313Conserved hypothetical protein. (399 aa)
SVI_0311Outer membrane efflux protein. (463 aa)
SVI_1466Polysaccharide biosynthesis protein. (919 aa)
atpEATP synthase F0, C subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. (83 aa)
atpBATP synthase F0, A subunit; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. (260 aa)
Your Current Organism:
Shewanella violacea
NCBI taxonomy Id: 637905
Other names: S. violacea DSS12, Shewanella violacea DSS12, Shewanella violacea JCM 10179, Shewanella violacea str. DSS12, Shewanella violacea strain DSS12
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