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| | rpmJ | Ribosomal protein L36; Belongs to the bacterial ribosomal protein bL36 family. (37 aa) |
| | SVI_0003 | Conserved hypothetical protein. (185 aa) |
| | SVI_0009 | SCO1/SenC family protein. (233 aa) |
| | rpmH | Ribosomal protein L34; Belongs to the bacterial ribosomal protein bL34 family. (45 aa) |
| | dnaA | Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family. (462 aa) |
| | recF | DNA replication and repair protein RecF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP; Belongs to the RecF family. (365 aa) |
| | SVI_0068 | DNA topoisomerase I-related protein. (187 aa) |
| | SVI_0094 | Transcriptional regulator, TetR family. (218 aa) |
| | menF | Menaquinone-specific isochorismate synthase; Catalyzes the conversion of chorismate to isochorismate. (448 aa) |
| | SVI_0152 | lemA protein. (178 aa) |
| | SVI_0181 | SCO1/SenC family protein. (230 aa) |
| | SVI_0183 | Cytochrome oxidase assembly protein, putative. (327 aa) |
| | SVI_0184 | Conserved hypothetical protein. (181 aa) |
| | SVI_0185 | Conserved hypothetical protein. (278 aa) |
| | coxG | Cytochrome c oxidase assembly protein coxG. (189 aa) |
| | plsB | Glycerol-3-phosphate acyltransferase; Belongs to the GPAT/DAPAT family. (807 aa) |
| | priA | Primosomal protein N; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily. (731 aa) |
| | rpmE | Ribosomal protein L31; Binds the 23S rRNA. (70 aa) |
| | mreB | Rod shape-determining protein MreB. (349 aa) |
| | SVI_0309 | Hydrolase, carbon-nitrogen family. (282 aa) |
| | SVI_0326 | DNA-binding protein, HU family; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. (91 aa) |
| | fhs | Formate--tetrahydrofolate ligase; Belongs to the formate--tetrahydrofolate ligase family. (570 aa) |
| | SVI_0371 | Conserved hypothetical protein. (360 aa) |
| | SVI_0392 | Sodium/hydrogen exchanger family protein. (403 aa) |
| | mgtE | Magnesium transporter; Acts as a magnesium transporter. (453 aa) |
| | rplM | Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. (143 aa) |
| | rpsI | Ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family. (130 aa) |
| | rpsF | Ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA. (140 aa) |
| | priB | Primosomal replication protein n; Binds single-stranded DNA at the primosome assembly site (PAS); Belongs to the PriB family. (101 aa) |
| | rpsR | Ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family. (75 aa) |
| | rplI | Ribosomal protein L9; Binds to the 23S rRNA. (150 aa) |
| | dnaB | Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily. (470 aa) |
| | SVI_0480 | Conserved hypothetical protein. (150 aa) |
| | sspB | Stringent starvation protein B. (172 aa) |
| | SVI_0549 | Pirin-related protein; Belongs to the pirin family. (224 aa) |
| | SVI_0574 | Amine oxidase, flavin-containing superfamily. (521 aa) |
| | SVI_0582 | RIO1/ZK632.3/MJ0444 family, putative. (284 aa) |
| | selO | Conserved hypothetical protein; Catalyzes the transfer of adenosine 5'-monophosphate (AMP) to Ser, Thr or Tyr residues of target proteins (AMPylation). Belongs to the SELO family. (493 aa) |
| | SVI_0617 | Conserved hypothetical protein. (316 aa) |
| | SVI_0690 | Conserved hypothetical protein. (176 aa) |
| | SVI_0767 | Conserved hypothetical protein. (290 aa) |
| | SVI_0770 | ABC transporter, ATP-binding protein. (589 aa) |
| | rplU | Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. (103 aa) |
| | rpmA | Ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family. (84 aa) |
| | apaG | apaG protein. (126 aa) |
| | SVI_0801 | Phosphotransferase enzyme family protein. (337 aa) |
| | gcdH | glutaryl-CoA dehydrogenase. (391 aa) |
| | SVI_0813 | 2-oxoisovalerate dehydrogenase, E1 component, alpha and beta subunit, putative. (742 aa) |
| | SVI_0826 | Conserved hypothetical protein. (203 aa) |
| | SVI_0827 | Conserved hypothetical protein; Belongs to the MEMO1 family. (271 aa) |
| | SVI_0835 | Hypothetical protein. (75 aa) |
| | chiA | Chitinase A. (863 aa) |
| | dnaG | DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. (575 aa) |
| | rpsU | Ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family. (71 aa) |
| | folK-1 | 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase. (176 aa) |
| | SVI_0899 | Conserved hypothetical protein. (220 aa) |
| | SVI_0929 | Conserved hypothetical protein. (83 aa) |
| | recO | DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination. (230 aa) |
| | rpsP | Ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family. (83 aa) |
| | rplS | Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. (117 aa) |
| | yfiA-2 | Ribosomal subunit interface protein. (120 aa) |
| | nfo | Endonuclease IV; Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin. (285 aa) |
| | SVI_0979 | Sensory box histidine kinase/response regulator. (678 aa) |
| | SVI_0992 | Hypothetical protein. (46 aa) |
| | SVI_0996 | Ankyrin repeat domain protein. (906 aa) |
| | SVI_0997 | Peptidase, M28D family. (467 aa) |
| | rpsT | Ribosomal protein S20; Binds directly to 16S ribosomal RNA. (88 aa) |
| | ribF | Riboflavin biosynthesis protein RibF; Belongs to the ribF family. (311 aa) |
| | SVI_1019 | Tryptophan halogenase, putative. (510 aa) |
| | SVI_1025 | Conserved hypothetical protein. (378 aa) |
| | SVI_1047 | Putative Holliday junction resolvase; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family. (140 aa) |
| | SVI_1063 | Conserved hypothetical protein. (72 aa) |
| | SVI_1067 | Na+/H+ antiporter, putative. (682 aa) |
| | adhB | Alcohol dehydrogenase II. (382 aa) |
| | SVI_1087 | Conserved hypothetical protein. (1050 aa) |
| | SVI_1105 | TPR domain protein. (252 aa) |
| | SVI_1129 | Conserved hypothetical protein. (255 aa) |
| | SVI_1136 | Conserved hypothetical protein. (146 aa) |
| | SVI_1169 | Acetyltransferase, GNAT family. (148 aa) |
| | SVI_1180 | Amidohydrolase family protein. (450 aa) |
| | SVI_1188 | Acetyltransferase, GNAT family. (143 aa) |
| | rpsB | Ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family. (242 aa) |
| | SVI_1255 | Patatin-like phospholipase family. (379 aa) |
| | etfB | Electron transfer flavoprotein, beta subunit. (249 aa) |
| | etfA | Electron transfer flavoprotein, alpha subunit. (307 aa) |
| | mvaB | hydroxymethylglutaryl-CoA lyase. (296 aa) |
| | ivd | isovaleryl-CoA dehydrogenase. (389 aa) |
| | SVI_1318 | Oxidoreductase, acyl-CoA dehydrogenase family. (745 aa) |
| | SVI_1339 | DNA repair protein, RadC family; Belongs to the UPF0758 family. (158 aa) |
| | ftsZ-1 | Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity. (381 aa) |
| | SVI_1373 | Fimbrial biogenesis and twitching motility protein, putative. (240 aa) |
| | guaB | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. (490 aa) |
| | tadA | Cytidine/deoxycytidylate deaminase family protein; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family. (169 aa) |
| | SVI_1393 | Transcriptional regulator, TetR family. (209 aa) |
| | SVI_1394 | Conserved hypothetical protein. (197 aa) |
| | SVI_1512 | Sigma factor sigB regulation protein rsbU, putative. (440 aa) |
| | SVI_1535 | Fumarylacetoacetate hydrolase family protein. (328 aa) |
| | maiA | Maleylacetoacetate isomerase. (219 aa) |
| | ogt | methylated-DNA--protein-cysteine methyltransferase; Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated. (161 aa) |
| | SVI_1611 | Conserved hypothetical protein. (304 aa) |
| | betI | Regulatory protein BetI; Repressor involved in choline regulation of the bet genes. (201 aa) |
| | smc | SMC family protein; Required for chromosome condensation and partitioning. Belongs to the SMC family. (1136 aa) |
| | SVI_1693 | CBS domain protein. (620 aa) |
| | SVI_1719 | Transcriptional regulator, TetR family. (184 aa) |
| | SVI_1752 | Conserved hypothetical protein. (243 aa) |
| | SVI_1753 | Conserved hypothetical protein. (293 aa) |
| | SVI_1776 | Peptidase, M28 family. (564 aa) |
| | SVI_1801 | Fumarylacetoacetate hydrolase family protein. (203 aa) |
| | SVI_1804 | Cytosolic long-chain acyl-CoA thioester hydrolase family protein. (142 aa) |
| | SVI_1806 | Chitinase. (985 aa) |
| | ppsA | Phosphoenolpyruvate synthase; Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate; Belongs to the PEP-utilizing enzyme family. (789 aa) |
| | rplY | Ribosomal protein L25; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. (95 aa) |
| | SVI_1890 | Conserved hypothetical protein; Belongs to the DnaA family. (236 aa) |
| | SVI_1928 | Alcohol dehydrogenase, iron-containing. (369 aa) |
| | SVI_1947 | Acetyltransferase, GNAT family. (95 aa) |
| | SVI_1985 | Helicase, Snf2 family. (694 aa) |
| | SVI_1987 | Conserved hypothetical protein. (56 aa) |
| | SVI_2012 | TPR domain protein. (343 aa) |
| | SVI_2042 | Alpha keto acid dehydrogenase complex, E1 component, alpha subunit. (414 aa) |
| | SVI_2043 | Alpha keto acid dehydrogenase complex, E1 component, beta subunit. (325 aa) |
| | SVI_2052 | ATP-dependent DNA helicase, RecQ family. (654 aa) |
| | rpsA | Ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. (555 aa) |
| | ihfB | Integration host factor, beta subunit; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. Belongs to the bacterial histone-like protein family. (95 aa) |
| | SVI_2079 | Oxidoreductase, short chain dehydrogenase/reductase family. (271 aa) |
| | SVI_2081 | acyl-CoA dehydrogenase family protein. (585 aa) |
| | SVI_2119 | UvrD/REP helicase family protein. (1018 aa) |
| | SVI_2248 | Type III secretion chaperone, putative. (184 aa) |
| | SVI_2254 | Type III secretion system chaperone, SycD family. (157 aa) |
| | SVI_2294 | ATPase, AAA family. (443 aa) |
| | rplT | Ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. (119 aa) |
| | rpmI | Ribosomal protein L35; Belongs to the bacterial ribosomal protein bL35 family. (64 aa) |
| | edd | 6-phosphogluconate dehydratase; Catalyzes the dehydration of 6-phospho-D-gluconate to 2- dehydro-3-deoxy-6-phospho-D-gluconate; Belongs to the IlvD/Edd family. (608 aa) |
| | SVI_2320 | Oxidoreductase, acyl-CoA dehydrogenase family. (758 aa) |
| | rnfC | Electron transport complex protein rnfC; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfC subfamily. (914 aa) |
| | nth | Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. (213 aa) |
| | SVI_2378 | Hypothetical protein. (71 aa) |
| | SVI_2381 | Oxidoreductase, acyl-CoA dehydrogenase family. (815 aa) |
| | SVI_2382 | Sodium/hydrogen exchanger family protein; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family. (629 aa) |
| | dnaQ-2 | DNA polymerase III, epsilon subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'- 5' exonuclease. (242 aa) |
| | rnhA-1 | Ribonuclease HI; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. (154 aa) |
| | SVI_2444 | Transcriptional regulator, TetR family. (193 aa) |
| | SVI_2448 | Transcriptional regulator, TetR family. (192 aa) |
| | SVI_2481 | ATP-dependent helicase, DinG family. (648 aa) |
| | ihfA | Integration host factor, alpha subunit; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. Belongs to the bacterial histone-like protein family. (98 aa) |
| | speA | Biosynthetic arginine decarboxylase; Catalyzes the biosynthesis of agmatine from arginine. (656 aa) |
| | SVI_2540 | Cytosolic long-chain acyl-CoA thioester hydrolase family protein. (159 aa) |
| | rpmF | Ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family. (56 aa) |
| | SVI_2559 | GTP-binding protein; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily. (312 aa) |
| | SVI_2560 | Phosphotyrosine protein phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. (158 aa) |
| | SVI_2562 | DNA ligase, ATP-dependent. (285 aa) |
| | SVI_2600 | Conserved hypothetical protein. (336 aa) |
| | SVI_2625 | Conserved hypothetical protein. (135 aa) |
| | SVI_2639 | acyl-CoA dehydrogenase family protein. (598 aa) |
| | SVI_2649 | Conserved hypothetical protein. (134 aa) |
| | SVI_2657 | Transcriptional regulator, TetR family. (197 aa) |
| | SVI_2667 | cobN/magnesium chelatase family protein. (1283 aa) |
| | bioB | Biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family. (354 aa) |
| | npdA | NAD-dependent deacetylase; Regulatory protein SIR2 homolog; Belongs to the sirtuin family. Class III subfamily. (280 aa) |
| | SVI_2727 | Glutamate synthase-related protein; Belongs to the glutamate synthase family. (543 aa) |
| | SVI_2744 | Acetyltransferase, GNAT family. (161 aa) |
| | SVI_2749 | Conserved hypothetical protein. (240 aa) |
| | hemH | Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family. (333 aa) |
| | recR | Recombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO. (199 aa) |
| | SVI_2782 | Conserved hypothetical protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. (109 aa) |
| | SVI_2841 | Hypothetical protein. (494 aa) |
| | SVI_2854 | Hypothetical protein. (45 aa) |
| | topB | DNA topoisomerase III; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA su [...] (649 aa) |
| | truA | tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs. (275 aa) |
| | SVI_2900 | Peptidase, M16 family; Belongs to the peptidase M16 family. (929 aa) |
| | SVI_2912 | TPR domain protein. (672 aa) |
| | SVI_2913 | Conserved hypothetical protein. (565 aa) |
| | SVI_2934 | Patatin-like phospholipase family. (311 aa) |
| | sbcD | Exonuclease SbcD, putative; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family. (381 aa) |
| | SVI_2966 | Conserved hypothetical protein. (260 aa) |
| | polB | DNA polymerase II. (811 aa) |
| | dinG | ATP-dependent helicase DinG; DNA-dependent ATPase and 5'-3' DNA helicase. (701 aa) |
| | SVI_2975 | Primosomal replication protein n, putative. (224 aa) |
| | SVI_2994 | DNA-binding protein, HU family; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. (90 aa) |
| | SVI_3029 | Conserved hypothetical protein. (133 aa) |
| | dhaA | Haloalkane dehalogenase. (295 aa) |
| | SVI_3059 | Conserved hypothetical protein. (134 aa) |
| | prpB | Methylisocitrate lyase; Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate. Belongs to the isocitrate lyase/PEP mutase superfamily. Methylisocitrate lyase family. (325 aa) |
| | SVI_3088 | Glutathione S-transferase, putative; Belongs to the GST superfamily. (285 aa) |
| | SVI_3101 | acyl-CoA dehydrogenase family protein. (385 aa) |
| | SVI_3118 | Conserved hypothetical protein. (79 aa) |
| | SVI_3133 | 4-hydroxybutyrate coenzyme A transferase, putative. (439 aa) |
| | yfiA-3 | Ribosomal subunit interface protein. (118 aa) |
| | recN | DNA repair protein RecN; May be involved in recombinational repair of damaged DNA. (555 aa) |
| | SVI_3207 | Psychrophilic phosphatase I. (371 aa) |
| | metY | O-acetylhomoserine (thiol)-lyase. (429 aa) |
| | SVI_3236 | Hypothetical protein. (78 aa) |
| | rpsO | Ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. (89 aa) |
| | infB | Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. (892 aa) |
| | nusA | N utilization substance protein A; Participates in both transcription termination and antitermination. (499 aa) |
| | SVI_3309 | Peptidase, M48 family. (275 aa) |
| | SVI_3329 | DnaK suppressor protein, putative. (88 aa) |
| | SVI_3343 | Alkylated DNA repair protein, putative. (220 aa) |
| | SVI_3350 | Sterol desaturase family protein. (281 aa) |
| | hemA | glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). (416 aa) |
| | ispE | 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol. (286 aa) |
| | engD | GTP-dependent nucleic acid-binding protein EngD; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner. (363 aa) |
| | ybeY | Conserved hypothetical protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. (158 aa) |
| | nadD | Nicotinate (nicotinamide) nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). (211 aa) |
| | SVI_3422 | Conserved hypothetical protein. (149 aa) |
| | SVI_3429 | Ornithine cyclodeaminase, putative. (318 aa) |
| | SVI_3436 | Glutathione S-transferase family protein; Belongs to the GST superfamily. (207 aa) |
| | SVI_3458 | Conserved hypothetical protein. (68 aa) |
| | SVI_3467 | Glutamate synthase, putative; Belongs to the glutamate synthase family. (523 aa) |
| | SVI_3528 | Deoxycytidylate deaminase, putative. (148 aa) |
| | folK-2 | 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase. (163 aa) |
| | ubiX | Phenylacrylic acid decarboxylase, 3-octaprenyl-4-hydroxybenzoate carboxy-lyase, putative; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family. (222 aa) |
| | SVI_3658 | Conserved hypothetical protein. (191 aa) |
| | SVI_3670 | Conserved hypothetical protein. (491 aa) |
| | SVI_3709 | Hypothetical protein. (348 aa) |
| | SVI_3718 | Conserved hypothetical protein. (175 aa) |
| | SVI_3729 | Peptidase, M28 family. (342 aa) |
| | SVI_3758 | ATP-dependent protease La (LON) domain protein, putative. (191 aa) |
| | SVI_3759 | Conserved hypothetical protein. (352 aa) |
| | SVI_3764 | Aminotransferase, class V. (765 aa) |
| | SVI_3801 | PAP2 family protein. (194 aa) |
| | SVI_3805 | Arginase family protein; Belongs to the arginase family. (347 aa) |
| | fis | DNA-binding protein Fis; Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters; Belongs to the transcriptional regulatory Fis family. (101 aa) |
| | lysA | Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. (414 aa) |
| | SVI_3856 | Transcriptional regulator, TetR family. (204 aa) |
| | SVI_3863 | Aminotransferase, class V. (380 aa) |
| | SVI_3895 | Acetyltransferase, GNAT family. (151 aa) |
| | purD | Phosphoribosylamine--glycine ligase; Belongs to the GARS family. (435 aa) |
| | SVI_3903 | Oxidoreductase, short chain dehydrogenase/reductase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (294 aa) |
| | gfa | Glutathione-dependent formaldehyde-activating enzyme; Catalyzes the condensation of formaldehyde and glutathione to S-hydroxymethylglutathione; Belongs to the Gfa family. (161 aa) |
| | SVI_3945 | Glutathione S-transferase family protein; Belongs to the GST superfamily. (207 aa) |
| | SVI_3957 | Hypothetical protein. (453 aa) |
| | SVI_3988 | Sterol desaturase family protein. (377 aa) |
| | argB | Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. (261 aa) |
| | argC | N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily. (326 aa) |
| | ftsZ-2 | Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity. (392 aa) |
| | recQ | ATP-dependent DNA helicase RecQ. (610 aa) |
| | argA | Amino-acid acetyltransferase; Belongs to the acetyltransferase family. ArgA subfamily. (444 aa) |
| | rpmG | Ribosomal protein L33; Belongs to the bacterial ribosomal protein bL33 family. (57 aa) |
| | rpmB | Ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family. (78 aa) |
| | radC | DNA repair protein RadC; Belongs to the UPF0758 family. (225 aa) |
| | slmA | Transcriptional regulator, TetR family; Required for nucleoid occlusion (NO) phenomenon, which prevents Z-ring formation and cell division over the nucleoid. Acts as a DNA-associated cell division inhibitor that binds simultaneously chromosomal DNA and FtsZ, and disrupts the assembly of FtsZ polymers. SlmA-DNA-binding sequences (SBS) are dispersed on non-Ter regions of the chromosome, preventing FtsZ polymerization at these regions. (197 aa) |
| | SVI_4085 | long-chain-fatty-acid--CoA ligase, putative. (567 aa) |
| | SVI_4095 | Conserved hypothetical protein. (454 aa) |
| | SVI_4102 | FAD-binding protein. (420 aa) |
| | SVI_4108 | SM-20 domain protein. (197 aa) |
| | dtd | D-tyrosyl-tRNA(Tyr) deacylase; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality. Belongs to the DTD family. (145 aa) |
| | rplQ | Ribosomal protein L17. (131 aa) |
| | rpsD | Ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. (206 aa) |
| | rpsK | Ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. (130 aa) |
| | rpsM | Ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family. (118 aa) |
| | rplO | Ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. (144 aa) |
| | rpmD | Ribosomal protein L30. (61 aa) |
| | rpsE | Ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family. (167 aa) |
| | rplR | Ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. (116 aa) |
| | rplF | Ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. (176 aa) |
| | rpsH | Ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family. (130 aa) |
| | rpsN | Ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family. (101 aa) |
| | rplE | Ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs. (179 aa) |
| | rplX | Ribosomal protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit. (104 aa) |
| | rplN | Ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family. (122 aa) |
| | rpsQ | Ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. (82 aa) |
| | rpmC | Ribosomal protein L29; Belongs to the universal ribosomal protein uL29 family. (63 aa) |
| | rplP | Ribosomal protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family. (136 aa) |
| | rpsC | Ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family. (229 aa) |
| | rplV | Ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome. (110 aa) |
| | rpsS | Ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA. (92 aa) |
| | rplB | Ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. (275 aa) |
| | rplW | Ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family. (99 aa) |
| | rplD | Ribosomal protein L4; Forms part of the polypeptide exit tunnel. (201 aa) |
| | rplC | Ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. (212 aa) |
| | rpsJ | Ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. (103 aa) |
| | rpsG | Ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. (156 aa) |
| | rpsL | Ribosomal protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit. (124 aa) |
| | rplL | Ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family. (122 aa) |
| | rplJ | Ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. (166 aa) |
| | rplA | Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. (233 aa) |
| | rplK | Ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. (142 aa) |
| | nusG | Transcription antitermination protein NusG; Participates in transcription elongation, termination and antitermination. (185 aa) |
| | SVI_4180 | RNA-binding protein. (156 aa) |
| | SVI_4184 | Fatty acid desaturase family protein. (374 aa) |
| | SVI_4187 | Acyltransferase family protein. (589 aa) |
| | SVI_4248 | Electron transfer flavoprotein-ubiquinone oxidoreductase, putative; Accepts electrons from ETF and reduces ubiquinone. (549 aa) |
| | SVI_4253 | Acetyltransferase, GNAT family. (144 aa) |
| | rlmF | Conserved hypothetical protein; Specifically methylates the adenine in position 1618 of 23S rRNA. (406 aa) |
| | SVI_4265 | Conserved hypothetical protein. (252 aa) |
| | SVI_4289 | long-chain-fatty-acid--CoA ligase, putative. (598 aa) |
| | SVI_4343 | ParB family protein; Belongs to the ParB family. (295 aa) |
