STRINGSTRING
SVI_0119 SVI_0119 SVI_4209 SVI_4209 SVI_3998 SVI_3998 SVI_3796 SVI_3796 SVI_3646 SVI_3646 SVI_2940 SVI_2940 SVI_2611 SVI_2611 SVI_2496 SVI_2496 SVI_2417 SVI_2417 SVI_2226 SVI_2226 SVI_2051 SVI_2051 SVI_1949 SVI_1949 mltF mltF SVI_1319 SVI_1319
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SVI_0119Conserved hypothetical protein. (247 aa)
SVI_4209Hypothetical protein. (290 aa)
SVI_3998Hypothetical protein. (253 aa)
SVI_3796Hypothetical protein. (1062 aa)
SVI_3646Extracellular solute-binding protein, family 3. (271 aa)
SVI_2940Extracellular solute-binding protein, family 3. (237 aa)
SVI_2611Conserved hypothetical protein. (244 aa)
SVI_2496Extracellular solute-binding protein, family 3. (258 aa)
SVI_2417Extracellular solute-binding protein, family 3. (232 aa)
SVI_2226Extracellular solute-binding protein, family 3. (257 aa)
SVI_2051Hypothetical protein. (238 aa)
SVI_1949Conserved hypothetical protein. (251 aa)
mltFTransglycosylase, Slt family; Murein-degrading enzyme that degrades murein glycan strands and insoluble, high-molecular weight murein sacculi, with the concomitant formation of a 1,6-anhydromuramoyl product. Lytic transglycosylases (LTs) play an integral role in the metabolism of the peptidoglycan (PG) sacculus. Their lytic action creates space within the PG sacculus to allow for its expansion as well as for the insertion of various structures such as secretion systems and flagella. (480 aa)
SVI_1319Conserved hypothetical protein. (240 aa)
Your Current Organism:
Shewanella violacea
NCBI taxonomy Id: 637905
Other names: S. violacea DSS12, Shewanella violacea DSS12, Shewanella violacea JCM 10179, Shewanella violacea str. DSS12, Shewanella violacea strain DSS12
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.