STRINGSTRING
SVI_3609 SVI_3609 SVI_3060 SVI_3060 SVI_4331 SVI_4331 SVI_4282 SVI_4282 SVI_4210 SVI_4210 SVI_3825 SVI_3825 SVI_3749 SVI_3749 SVI_3608 SVI_3608 SVI_3570 SVI_3570 SVI_3558 SVI_3558 SVI_3472 SVI_3472 SVI_3211 SVI_3211 SVI_2815 SVI_2815 SVI_2685 SVI_2685 SVI_2664 SVI_2664 viuA viuA SVI_2209 SVI_2209 SVI_1963 SVI_1963 SVI_1397 SVI_1397 SVI_1320 SVI_1320 SVI_1179 SVI_1179 SVI_0648 SVI_0648 SVI_0447 SVI_0447
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SVI_3609Hypothetical protein. (229 aa)
SVI_3060TonB-dependent receptor. (727 aa)
SVI_4331TonB-dependent siderophore receptor. (738 aa)
SVI_4282Outer membrane iron(III) dicitrate receptor, putative. (708 aa)
SVI_4210TonB-dependent receptor. (717 aa)
SVI_3825TonB-dependent receptor. (1002 aa)
SVI_3749TonB-dependent receptor. (685 aa)
SVI_3608Hypothetical protein. (498 aa)
SVI_3570TonB-dependent siderophore receptor. (713 aa)
SVI_3558TonB-dependent heme/hemoglobin receptor. (672 aa)
SVI_3472TonB-dependent receptor. (667 aa)
SVI_3211TonB-dependent siderophore receptor. (704 aa)
SVI_2815TonB-dependent heme receptor. (730 aa)
SVI_2685TonB-dependent receptor. (724 aa)
SVI_2664TonB-dependent heme/hemoglobin receptor. (719 aa)
viuAFerric vibriobactin receptor. (688 aa)
SVI_2209TonB-dependent receptor. (715 aa)
SVI_1963TonB-dependent siderophore receptor. (706 aa)
SVI_1397TonB-dependent siderophore receptor. (710 aa)
SVI_1320TonB-dependent receptor. (777 aa)
SVI_1179TonB-dependent receptor. (820 aa)
SVI_0648TonB-dependent receptor. (700 aa)
SVI_0447Oar-like protein. (970 aa)
Your Current Organism:
Shewanella violacea
NCBI taxonomy Id: 637905
Other names: S. violacea DSS12, Shewanella violacea DSS12, Shewanella violacea JCM 10179, Shewanella violacea str. DSS12, Shewanella violacea strain DSS12
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