Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SVI_3421 | SVI_3863 | SVI_3421 | SVI_3863 | CDP-diacylglycerol--serine O-phosphatidyltransferase, putative; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. | Aminotransferase, class V. | 0.900 |
| SVI_3421 | glyA | SVI_3421 | SVI_3200 | CDP-diacylglycerol--serine O-phosphatidyltransferase, putative; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. | Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.900 |
| SVI_3421 | ilvA | SVI_3421 | SVI_3864 | CDP-diacylglycerol--serine O-phosphatidyltransferase, putative; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. | Threonine dehydratase biosynthetic; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA. | 0.901 |
| SVI_3421 | pssA | SVI_3421 | SVI_2085 | CDP-diacylglycerol--serine O-phosphatidyltransferase, putative; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. | CDP-diacylglycerol--serine O-phosphatidyltransferase. | 0.915 |
| SVI_3421 | sdaA-1 | SVI_3421 | SVI_0703 | CDP-diacylglycerol--serine O-phosphatidyltransferase, putative; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. | L-serine dehydratase 1; Belongs to the iron-sulfur dependent L-serine dehydratase family. | 0.900 |
| SVI_3421 | sdaA-2 | SVI_3421 | SVI_2766 | CDP-diacylglycerol--serine O-phosphatidyltransferase, putative; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. | L-serine dehydratase 1; Belongs to the iron-sulfur dependent L-serine dehydratase family. | 0.900 |
| SVI_3421 | serB | SVI_3421 | SVI_3271 | CDP-diacylglycerol--serine O-phosphatidyltransferase, putative; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. | Phosphoserine phosphatase. | 0.906 |
| SVI_3421 | trpA | SVI_3421 | SVI_2808 | CDP-diacylglycerol--serine O-phosphatidyltransferase, putative; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. | Tryptophan synthase, alpha subunit; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | 0.900 |
| SVI_3421 | trpB | SVI_3421 | SVI_2807 | CDP-diacylglycerol--serine O-phosphatidyltransferase, putative; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. | Tryptophan synthase, beta subunit; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. | 0.900 |
| SVI_3863 | SVI_3421 | SVI_3863 | SVI_3421 | Aminotransferase, class V. | CDP-diacylglycerol--serine O-phosphatidyltransferase, putative; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. | 0.900 |
| SVI_3863 | gcvH | SVI_3863 | SVI_3531 | Aminotransferase, class V. | Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. | 0.917 |
| SVI_3863 | gcvP | SVI_3863 | SVI_3530 | Aminotransferase, class V. | Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.939 |
| SVI_3863 | gcvT | SVI_3863 | SVI_3532 | Aminotransferase, class V. | Glycine cleavage system T protein; The glycine cleavage system catalyzes the degradation of glycine. | 0.941 |
| SVI_3863 | glyA | SVI_3863 | SVI_3200 | Aminotransferase, class V. | Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.938 |
| SVI_3863 | hprA | SVI_3863 | SVI_0804 | Aminotransferase, class V. | Glycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.927 |
| SVI_3863 | ilvA | SVI_3863 | SVI_3864 | Aminotransferase, class V. | Threonine dehydratase biosynthetic; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA. | 0.957 |
| SVI_3863 | kbl | SVI_3863 | SVI_0093 | Aminotransferase, class V. | 2-amino-3-ketobutyrate coenzyme A ligase; Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA. | 0.911 |
| SVI_3863 | lpdA | SVI_3863 | SVI_0266 | Aminotransferase, class V. | Pyruvate dehydrogenase complex, E3 component, lipoamide dehydrogenase. | 0.902 |
| SVI_3863 | ltaA | SVI_3863 | SVI_1057 | Aminotransferase, class V. | L-allo-threonine aldolase. | 0.930 |
| SVI_3863 | pssA | SVI_3863 | SVI_2085 | Aminotransferase, class V. | CDP-diacylglycerol--serine O-phosphatidyltransferase. | 0.900 |
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