Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SVI_1676 | gabD | SVI_1676 | SVI_3642 | NAD-dependent aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | Succinate-semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 0.919 |
| atoB | fadB-1 | SVI_3103 | SVI_0052 | acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | Fatty oxidation complex, alpha subunit; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family. | 0.999 |
| atoB | fadB-2 | SVI_3103 | SVI_2905 | acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | Fatty oxidation complex, alpha subunit; Catalyzes the formation of a hydroxyacyl-CoA by addition of water on enoyl-CoA. Also exhibits 3-hydroxyacyl-CoA epimerase and 3- hydroxyacyl-CoA dehydrogenase activities; In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family. | 0.999 |
| atoB | fadB-3 | SVI_3103 | SVI_3132 | acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | Fatty oxidation complex, alpha subunit; In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family. | 0.999 |
| atoB | gcdH | SVI_3103 | SVI_0812 | acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | glutaryl-CoA dehydrogenase. | 0.719 |
| atoB | sucB | SVI_3103 | SVI_2734 | acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2). | 0.812 |
| fadB-1 | atoB | SVI_0052 | SVI_3103 | Fatty oxidation complex, alpha subunit; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family. | acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.999 |
| fadB-1 | fadB-2 | SVI_0052 | SVI_2905 | Fatty oxidation complex, alpha subunit; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family. | Fatty oxidation complex, alpha subunit; Catalyzes the formation of a hydroxyacyl-CoA by addition of water on enoyl-CoA. Also exhibits 3-hydroxyacyl-CoA epimerase and 3- hydroxyacyl-CoA dehydrogenase activities; In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family. | 0.958 |
| fadB-1 | fadB-3 | SVI_0052 | SVI_3132 | Fatty oxidation complex, alpha subunit; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family. | Fatty oxidation complex, alpha subunit; In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family. | 0.954 |
| fadB-1 | gcdH | SVI_0052 | SVI_0812 | Fatty oxidation complex, alpha subunit; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family. | glutaryl-CoA dehydrogenase. | 0.985 |
| fadB-2 | atoB | SVI_2905 | SVI_3103 | Fatty oxidation complex, alpha subunit; Catalyzes the formation of a hydroxyacyl-CoA by addition of water on enoyl-CoA. Also exhibits 3-hydroxyacyl-CoA epimerase and 3- hydroxyacyl-CoA dehydrogenase activities; In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family. | acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.999 |
| fadB-2 | fadB-1 | SVI_2905 | SVI_0052 | Fatty oxidation complex, alpha subunit; Catalyzes the formation of a hydroxyacyl-CoA by addition of water on enoyl-CoA. Also exhibits 3-hydroxyacyl-CoA epimerase and 3- hydroxyacyl-CoA dehydrogenase activities; In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family. | Fatty oxidation complex, alpha subunit; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family. | 0.958 |
| fadB-2 | fadB-3 | SVI_2905 | SVI_3132 | Fatty oxidation complex, alpha subunit; Catalyzes the formation of a hydroxyacyl-CoA by addition of water on enoyl-CoA. Also exhibits 3-hydroxyacyl-CoA epimerase and 3- hydroxyacyl-CoA dehydrogenase activities; In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family. | Fatty oxidation complex, alpha subunit; In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family. | 0.959 |
| fadB-2 | gcdH | SVI_2905 | SVI_0812 | Fatty oxidation complex, alpha subunit; Catalyzes the formation of a hydroxyacyl-CoA by addition of water on enoyl-CoA. Also exhibits 3-hydroxyacyl-CoA epimerase and 3- hydroxyacyl-CoA dehydrogenase activities; In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family. | glutaryl-CoA dehydrogenase. | 0.987 |
| fadB-3 | atoB | SVI_3132 | SVI_3103 | Fatty oxidation complex, alpha subunit; In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family. | acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.999 |
| fadB-3 | fadB-1 | SVI_3132 | SVI_0052 | Fatty oxidation complex, alpha subunit; In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family. | Fatty oxidation complex, alpha subunit; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family. | 0.954 |
| fadB-3 | fadB-2 | SVI_3132 | SVI_2905 | Fatty oxidation complex, alpha subunit; In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family. | Fatty oxidation complex, alpha subunit; Catalyzes the formation of a hydroxyacyl-CoA by addition of water on enoyl-CoA. Also exhibits 3-hydroxyacyl-CoA epimerase and 3- hydroxyacyl-CoA dehydrogenase activities; In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family. | 0.959 |
| fadB-3 | gcdH | SVI_3132 | SVI_0812 | Fatty oxidation complex, alpha subunit; In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family. | glutaryl-CoA dehydrogenase. | 0.987 |
| gabD | SVI_1676 | SVI_3642 | SVI_1676 | Succinate-semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | NAD-dependent aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 0.919 |
| gcdH | atoB | SVI_0812 | SVI_3103 | glutaryl-CoA dehydrogenase. | acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.719 |
page 1 of 2