STRINGSTRING
SVI_0180 SVI_0180 ftsE ftsE ftsX ftsX SVI_0415 SVI_0415 SVI_0422 SVI_0422 SVI_0423 SVI_0423 SVI_0424 SVI_0424 SVI_0425 SVI_0425 SVI_0426 SVI_0426 cydD cydD cydC cydC kpsM kpsM kpsT kpsT SVI_0615 SVI_0615 rbsD rbsD rbsA rbsA rbsC rbsC rbsB rbsB SVI_0661 SVI_0661 SVI_0778 SVI_0778 SVI_0779 SVI_0779 SVI_0780 SVI_0780 SVI_0839 SVI_0839 SVI_0840 SVI_0840 SVI_0944 SVI_0944 SVI_1062 SVI_1062 SVI_1152 SVI_1152 SVI_1514 SVI_1514 SVI_1543 SVI_1543 SVI_1739 SVI_1739 SVI_1740 SVI_1740 SVI_1741 SVI_1741 SVI_2418 SVI_2418 SVI_2528 SVI_2528 msbA msbA SVI_2755 SVI_2755 SVI_2756 SVI_2756 lolD lolD lolE lolE sapA sapA sapB sapB sapC sapC sapD sapD sapF sapF SVI_3025 SVI_3025 SVI_3026 SVI_3026 SVI_3027 SVI_3027 SVI_3028 SVI_3028 pstB pstB SVI_3055 SVI_3055 SVI_3056 SVI_3056 SVI_3259 SVI_3259 SVI_3379 SVI_3379 SVI_3818 SVI_3818 rtxB rtxB SVI_3915 SVI_3915 ccmA ccmA ccmB ccmB ccmC ccmC ccmD ccmD SVI_4241 SVI_4241 SVI_4242 SVI_4242 modA modA natA natA SVI_4295 SVI_4295
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SVI_0180Hypothetical protein. (104 aa)
ftsECell division ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division. (231 aa)
ftsXCell division permease protein FtsX; Part of the ABC transporter FtsEX involved in cellular division; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily. (321 aa)
SVI_0415ABC transporter, ATP-binding protein. (240 aa)
SVI_0422ABC transporter, ATP-binding protein, putative. (272 aa)
SVI_0423Conserved hypothetical protein. (258 aa)
SVI_0424Mce-related protein. (154 aa)
SVI_0425Toluene tolerance protein, putative. (218 aa)
SVI_0426SpoIIAA family protein. (100 aa)
cydDABC transporter, ATP-binding protein CydD. (611 aa)
cydCABC transporter, ATP-binding protein CydC. (597 aa)
kpsMPolysialic acid transport protein KpsM. (259 aa)
kpsTPolysialic acid transport ATP-binding protein KpsT. (221 aa)
SVI_0615Conserved hypothetical protein. (348 aa)
rbsDRibose ABC transporter protein; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose. (140 aa)
rbsARibose ABC transporter, ATP-binding protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family. (494 aa)
rbsCRibose ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family. (323 aa)
rbsBRibose ABC transporter, periplasmic D-ribose-binding protein. (292 aa)
SVI_0661ABC transporter, periplasmic substrate-binding protein, putative. (274 aa)
SVI_0778iron(III) ABC transporter, periplasmic iron(III)-binding protein. (335 aa)
SVI_0779iron(III) ABC transporter, permease protein. (543 aa)
SVI_0780iron(III) ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily. (342 aa)
SVI_0839Conserved hypothetical protein. (370 aa)
SVI_0840Conserved hypothetical protein. (352 aa)
SVI_0944Toxin secretion ATP-binding protein. (769 aa)
SVI_1062Conserved hypothetical protein. (268 aa)
SVI_1152Phosphate-binding protein. (323 aa)
SVI_1514Phosphate ABC transporter, periplasmic phosphate-binding protein, putative. (292 aa)
SVI_1543ABC transporter, ATP-binding/permease protein, putative. (609 aa)
SVI_1739Phosphate ABC transporter, periplasmic phosphate-binding protein, putative. (306 aa)
SVI_1740ABC transporter, ATP-binding protein. (229 aa)
SVI_1741Phosphonate ABC transporter, permease protein, putative. (516 aa)
SVI_2418Sugar ABC transporter, periplasmic sugar-binding protein, putative. (573 aa)
SVI_2528Conserved hypothetical protein. (278 aa)
msbAlipidA export ATP-binding/permease protein msbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation. (607 aa)
SVI_2755Hypothetical protein. (109 aa)
SVI_2756Lipoprotein releasing system transmembrane protein LolC, putative. (310 aa)
lolDLipoprotein releasing system ATP-binding protein LolD; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner. (236 aa)
lolELipoprotein releasing system transmembrane protein LolE. (410 aa)
sapAPeptide ABC transporter, periplasmic peptide-binding protein. (546 aa)
sapBPeptide ABC transporter, permease protein. (343 aa)
sapCPeptide ABC transporter, permease protein. (296 aa)
sapDPeptide ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily. (337 aa)
sapFPeptide ABC transporter, ATP-binding protein. (270 aa)
SVI_3025Iron transport protein, periplasmic-binding protein; Belongs to the bacterial solute-binding protein 9 family. (297 aa)
SVI_3026Iron-compound ABC transporter, ATP-binding protein, putative. (287 aa)
SVI_3027Iron-compound ABC transporter, ATP-binding protein. (317 aa)
SVI_3028Iron (chelated) ABC transporter, permease protein. (305 aa)
pstBPhosphate ABC transporter, ATP-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family. (272 aa)
SVI_3055Phosphate ABC transporter, permease protein, putative. (555 aa)
SVI_3056Phosphate ABC transporter, permease protein, putative. (751 aa)
SVI_3259Sugar-binding protein, putative. (338 aa)
SVI_3379Toxin secretion ABC transporter protein, HlyB family. (746 aa)
SVI_3818Toxin secretion ATP-binding protein. (706 aa)
rtxBToxin secretion ATP-binding protein. (724 aa)
SVI_3915Glycine betaine ABC transporter, substrate-binding protein. (313 aa)
ccmAHeme exporter protein CcmA; Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. CcmA exporter (TC 3.A.1.107) family. (215 aa)
ccmBHeme exporter protein CcmB; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmB/CycW/HelB family. (228 aa)
ccmCHeme exporter protein CcmC; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmC/CycZ/HelC family. (248 aa)
ccmDHeme exporter protein CcmD; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmD/CycX/HelD family. (66 aa)
SVI_4241Molybdenum ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily. (368 aa)
SVI_4242Molybdenum ABC transporter, permease protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. (226 aa)
modAMolybdenum ABC transporter, periplasmic molybdenum-binding protein. (277 aa)
natAATP-binding transport protein NatA. (244 aa)
SVI_4295Transporter, putative. (387 aa)
Your Current Organism:
Shewanella violacea
NCBI taxonomy Id: 637905
Other names: S. violacea DSS12, Shewanella violacea DSS12, Shewanella violacea JCM 10179, Shewanella violacea str. DSS12, Shewanella violacea strain DSS12
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