STRINGSTRING
prkB prkB ROD_44551 ROD_44551 ROD_44561 ROD_44561 mdcA mdcA mdcB mdcB mdcC mdcC mdcD mdcD mdcE mdcE mdcF mdcF mdcG mdcG mdcH mdcH
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
prkBProbable phosphoribulokinase. (289 aa)
ROD_44551Conserved hypothetical protein; Belongs to the UPF0270 family. (72 aa)
ROD_44561Putative hydrolase. (338 aa)
mdcAPutative malonate decarboxylase acyl carrier protein transferase MdcA. (551 aa)
mdcBPutative 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase; Involved in the formation of 2-(5''-phosphoribosyl)-3'- dephosphocoenzyme-A, the prosthetic group of the acyl-carrier protein of the malonate decarboxylase; Belongs to the CitG/MdcB family. (281 aa)
mdcCPutative malonate decarboxylase acyl carrier protein; Subunit of malonate decarboxylase, it is an acyl carrier protein to which acetyl and malonyl thioester residues are bound via a 2'-(5''-phosphoribosyl)-3'-dephospho-CoA prosthetic group and turn over during the catalytic mechanism. (99 aa)
mdcDPutative malonate decarboxylase beta subunit MdcD. (277 aa)
mdcEPutative malonate decarboxylase gamma subunit MdcE. (266 aa)
mdcFPutative malonate transporter MdcF. (319 aa)
mdcGPutative phosphoribosyl-dephospho-CoA transferase. (205 aa)
mdcHPutative malonyl-CoA: acyl carier protein-SH transacylase MdcH. (298 aa)
Your Current Organism:
Citrobacter rodentium
NCBI taxonomy Id: 637910
Other names: C. rodentium ICC168, Citrobacter rodentium ICC168, Citrobacter rodentium str. ICC168, Citrobacter rodentium strain ICC168
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