STRINGSTRING
Thal_0248 Thal_0248 Thal_0471 Thal_0471 Thal_0473 Thal_0473 Thal_0476 Thal_0476 Thal_0497 Thal_0497 Thal_0578 Thal_0578 Thal_0593 Thal_0593 Thal_0608 Thal_0608 Thal_0762 Thal_0762 Thal_0863 Thal_0863 Thal_1030 Thal_1030 Thal_1082 Thal_1082 Thal_1388 Thal_1388 Thal_1526 Thal_1526
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Thal_0248KEGG: geo:Geob_2097 outer membrane protein assembly complex, YaeT protein; TIGRFAM: outer membrane protein assembly complex, YaeT protein; PFAM: surface antigen (D15); surface antigen variable number repeat protein. (774 aa)
Thal_0471PFAM: peptidase M28; KEGG: hypothetical protein. (354 aa)
Thal_0473PFAM: OmpA/MotB domain protein; KEGG: dma:DMR_43090 putative outer membrane protein. (209 aa)
Thal_0476PFAM: surface antigen (D15); surface antigen variable number repeat protein; KEGG: sat:SYN_00921 outer membrane protein. (862 aa)
Thal_0497PFAM: von Willebrand factor type A; SMART: von Willebrand factor type A; KEGG: MDN1; Huge dynein-related AAA-type ATPase (midasin), forms extended pre-60S particle with the Rix1 complex (Rix1p-Ipi1p-Ipi3p), may mediate ATP- dependent remodeling of 60S subunits and subsequent export from nucleoplasm to -TRUNCATED-. (621 aa)
Thal_0578PFAM: outer membrane chaperone Skp (OmpH); KEGG: glo:Glov_0761 outer membrane chaperone Skp (OmpH). (161 aa)
Thal_0593KEGG: pca:Pcar_3121 hypothetical protein. (500 aa)
Thal_0608PFAM: Organic solvent tolerance protein; KEGG: gme:Gmet_2474 organic solvent tolerance protein, putative. (654 aa)
Thal_0762PFAM: protein of unknown function DUF302; KEGG: tbd:Tbd_0905 hypothetical protein. (293 aa)
Thal_0863KEGG: wsu:WS2067 hypothetical protein; TIGRFAM: lipopolysaccharide transport periplasmic protein LptA; PFAM: OstA family protein. (152 aa)
Thal_1030TIGRFAM: outer membrane assembly lipoprotein YfiO; KEGG: pca:Pcar_2383 TPR domain-containing protein. (301 aa)
Thal_1082PFAM: ATPase associated with various cellular activities AAA_5; KEGG: hha:Hhal_1044 CbbQ/NirQ/NorQ C-terminal domain-containing protein. (936 aa)
Thal_1388PFAM: oxidoreductase domain protein; KEGG: hha:Hhal_1859 oxidoreductase domain- containing protein. (259 aa)
Thal_1526PFAM: chromosome segregation and condensation protein ScpA; KEGG: mfa:Mfla_1874 condensin subunit ScpA. (207 aa)
Your Current Organism:
Thermocrinis albus
NCBI taxonomy Id: 638303
Other names: T. albus DSM 14484, Thermocrinis albus DSM 14484, Thermocrinis albus HI 11/12, Thermocrinis albus str. DSM 14484, Thermocrinis albus strain DSM 14484
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