Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| BAI79633.1 | BAI80124.1 | DEFDS_0121 | DEFDS_0644 | Undecaprenyl pyrophosphate synthetase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids. | Conserved hypothetical protein; Similar to heptaprenyl diphosphate synthase component I. | 0.900 |
| BAI79633.1 | BAI80417.1 | DEFDS_0121 | DEFDS_0945 | Undecaprenyl pyrophosphate synthetase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids. | Geranyl diphosphate synthase / farnesyl diphosphate synthase; Belongs to the FPP/GGPP synthase family. | 0.949 |
| BAI79633.1 | dxr | DEFDS_0121 | DEFDS_0123 | Undecaprenyl pyrophosphate synthetase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids. | 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Belongs to the DXR family. | 0.981 |
| BAI79633.1 | ispB | DEFDS_0121 | DEFDS_0648 | Undecaprenyl pyrophosphate synthetase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids. | Octaprenyl-diphosphate synthase; Belongs to the FPP/GGPP synthase family. | 0.946 |
| BAI80124.1 | BAI79633.1 | DEFDS_0644 | DEFDS_0121 | Conserved hypothetical protein; Similar to heptaprenyl diphosphate synthase component I. | Undecaprenyl pyrophosphate synthetase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids. | 0.900 |
| BAI80124.1 | BAI80417.1 | DEFDS_0644 | DEFDS_0945 | Conserved hypothetical protein; Similar to heptaprenyl diphosphate synthase component I. | Geranyl diphosphate synthase / farnesyl diphosphate synthase; Belongs to the FPP/GGPP synthase family. | 0.917 |
| BAI80124.1 | ispB | DEFDS_0644 | DEFDS_0648 | Conserved hypothetical protein; Similar to heptaprenyl diphosphate synthase component I. | Octaprenyl-diphosphate synthase; Belongs to the FPP/GGPP synthase family. | 0.983 |
| BAI80417.1 | BAI79633.1 | DEFDS_0945 | DEFDS_0121 | Geranyl diphosphate synthase / farnesyl diphosphate synthase; Belongs to the FPP/GGPP synthase family. | Undecaprenyl pyrophosphate synthetase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids. | 0.949 |
| BAI80417.1 | BAI80124.1 | DEFDS_0945 | DEFDS_0644 | Geranyl diphosphate synthase / farnesyl diphosphate synthase; Belongs to the FPP/GGPP synthase family. | Conserved hypothetical protein; Similar to heptaprenyl diphosphate synthase component I. | 0.917 |
| BAI80417.1 | dxs | DEFDS_0945 | DEFDS_0944 | Geranyl diphosphate synthase / farnesyl diphosphate synthase; Belongs to the FPP/GGPP synthase family. | 1-deoxy-D-xylulose-5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily. | 0.889 |
| BAI80417.1 | ispB | DEFDS_0945 | DEFDS_0648 | Geranyl diphosphate synthase / farnesyl diphosphate synthase; Belongs to the FPP/GGPP synthase family. | Octaprenyl-diphosphate synthase; Belongs to the FPP/GGPP synthase family. | 0.912 |
| BAI80417.1 | ispH | DEFDS_0945 | DEFDS_2096 | Geranyl diphosphate synthase / farnesyl diphosphate synthase; Belongs to the FPP/GGPP synthase family. | Hydroxymethylbutenyl pyrophosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family. | 0.917 |
| BAI81292.1 | BAI81380.1 | DEFDS_1837 | DEFDS_1929 | acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | Thiolase family protein; Similar to 3-ketoacyl-CoA thiolase EC 2.3.1.16 / acetyl-CoA C-acetyltransferase AtoB EC 2.3.1.9; Belongs to the thiolase-like superfamily. Thiolase family. | 0.900 |
| BAI81380.1 | BAI81292.1 | DEFDS_1929 | DEFDS_1837 | Thiolase family protein; Similar to 3-ketoacyl-CoA thiolase EC 2.3.1.16 / acetyl-CoA C-acetyltransferase AtoB EC 2.3.1.9; Belongs to the thiolase-like superfamily. Thiolase family. | acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.900 |
| dxr | BAI79633.1 | DEFDS_0123 | DEFDS_0121 | 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Belongs to the DXR family. | Undecaprenyl pyrophosphate synthetase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids. | 0.981 |
| dxr | dxs | DEFDS_0123 | DEFDS_0944 | 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Belongs to the DXR family. | 1-deoxy-D-xylulose-5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily. | 0.981 |
| dxr | ispD | DEFDS_0123 | DEFDS_1001 | 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Belongs to the DXR family. | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D- erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate (MEP). | 0.985 |
| dxr | ispE | DEFDS_0123 | DEFDS_0460 | 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Belongs to the DXR family. | 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol. | 0.824 |
| dxr | ispF | DEFDS_0123 | DEFDS_1652 | 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Belongs to the DXR family. | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4-diphosphocytidyl-2- C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP). | 0.854 |
| dxr | ispG | DEFDS_0123 | DEFDS_1800 | 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Belongs to the DXR family. | 4-hydroy-3-methylbut-2-en-1-yl diphosphate synthase; Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME- 2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. Belongs to the IspG family. | 0.859 |
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