STRINGSTRING
gpmA gpmA fbp fbp Snov_0426 Snov_0426 Snov_0427 Snov_0427 Snov_0680 Snov_0680 Snov_1293 Snov_1293 Snov_1366 Snov_1366 eno eno tpiA tpiA Snov_1916 Snov_1916 Snov_2250 Snov_2250 pgi pgi ppc ppc Snov_2767 Snov_2767 Snov_2818 Snov_2818 Snov_3069 Snov_3069 Snov_3070 Snov_3070 pgk pgk Snov_3072 Snov_3072 Snov_3120 Snov_3120 Snov_3163 Snov_3163 Snov_3164 Snov_3164 Snov_3187 Snov_3187 zwf zwf pgl pgl edd edd Snov_3674 Snov_3674 Snov_3855 Snov_3855 zwf-2 zwf-2 Snov_3857 Snov_3857 tal tal Snov_4007 Snov_4007 pckA pckA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
gpmAPhosphoglycerate mutase 1 family; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate; Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily. (207 aa)
fbpPFAM: Inositol phosphatase/fructose-16-bisphosphatase; KEGG: xau:Xaut_3528 inositol phosphatase/fructose-16-bisphosphatase. (341 aa)
Snov_0426Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate. (674 aa)
Snov_0427Fructose-bisphosphate aldolase, class II, Calvin cycle subtype; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis. (361 aa)
Snov_0680KEGG: azc:AZC_2267 L-lactate dehydrogenase; PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase. (379 aa)
Snov_1293TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; KEGG: tmz:Tmz1t_1850 glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. (347 aa)
Snov_1366TIGRFAM: fructose-1,6-bisphosphatase, class II; KEGG: bja:blr4363 fructose 1,6-bisphosphatase II; PFAM: GlpX family protein. (331 aa)
enoEnolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. (427 aa)
tpiATriosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. (251 aa)
Snov_1916PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase; KEGG: mrd:Mrad2831_3410 L-lactate dehydrogenase (cytochrome). (421 aa)
Snov_2250PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase; KEGG: smd:Smed_2743 phosphoglucomutase. (542 aa)
pgiKEGG: bov:BOV_0299 glucose-6-phosphate isomerase; PFAM: phosphoglucose isomerase (PGI); Belongs to the GPI family. (547 aa)
ppcPhosphoenolpyruvate carboxylase; Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle; Belongs to the PEPCase type 1 family. (928 aa)
Snov_2767KEGG: avi:Avi_5923 pyruvate kinase; PFAM: Pyruvate kinase barrel; Belongs to the pyruvate kinase family. (501 aa)
Snov_2818Glucokinase; KEGG: xau:Xaut_2047 glucokinase; PFAM: Glucokinase; Belongs to the bacterial glucokinase family. (323 aa)
Snov_3069Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate. (663 aa)
Snov_3070TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; KEGG: bid:Bind_3468 glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. (335 aa)
pgkKEGG: azc:AZC_0502 phosphoglycerate kinase; PFAM: phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family. (399 aa)
Snov_3072KEGG: xau:Xaut_3077 fructose-bisphosphate aldolase; PFAM: fructose-bisphosphate aldolase class-I. (340 aa)
Snov_3120PFAM: FAD linked oxidase domain protein; KEGG: met:M446_2035 FAD linked oxidase domain-containing protein. (471 aa)
Snov_3163Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. (1154 aa)
Snov_3164TIGRFAM: pyruvate kinase; KEGG: azc:AZC_3491 pyruvate kinase; PFAM: Pyruvate kinase barrel; Pyruvate kinase alpha/beta; Belongs to the pyruvate kinase family. (516 aa)
Snov_3187Phosphoketolase; KEGG: bid:Bind_2204 putative phosphoketolase; PFAM: Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase-like; D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase. (790 aa)
zwfGlucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone. (491 aa)
pgl6-phosphogluconolactonase; Hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate. (227 aa)
edd6-phosphogluconate dehydratase; Catalyzes the dehydration of 6-phospho-D-gluconate to 2- dehydro-3-deoxy-6-phospho-D-gluconate; Belongs to the IlvD/Edd family. (612 aa)
Snov_3674PFAM: ROK family protein; KEGG: gbe:GbCGDNIH1_0537 polyphosphate glucokinase. (236 aa)
Snov_3855KEGG: gdj:Gdia_2352 Cof-like hydrolase; TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase type 3. (283 aa)
zwf-2Glucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone. (513 aa)
Snov_38576-phosphogluconate dehydrogenase, decarboxylating; KEGG: bid:Bind_0459 6-phosphogluconate dehydrogenase-like protein; TIGRFAM: 6-phosphogluconate dehydrogenase, decarboxylating; PFAM: 6-phosphogluconate dehydrogenase NAD-binding; 6-phosphogluconate dehydrogenase domain protein. (326 aa)
talTransaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway. (323 aa)
Snov_4007TIGRFAM: pyruvate, phosphate dikinase; KEGG: azc:AZC_0410 pyruvate phosphate dikinase; PFAM: pyruvate phosphate dikinase PEP/pyruvate-binding; PEP-utilising protein mobile region; PEP-utilizing protein; Belongs to the PEP-utilizing enzyme family. (892 aa)
pckAPhosphoenolpyruvate carboxykinase (ATP); Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA. (537 aa)
Your Current Organism:
Starkeya novella
NCBI taxonomy Id: 639283
Other names: S. novella DSM 506, Starkeya novella DSM 506, Starkeya novella IAM 12100, Starkeya novella str. DSM 506, Starkeya novella strain DSM 506
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.