STRINGSTRING
Snov_0164 Snov_0164 Snov_0165 Snov_0165 Snov_0166 Snov_0166 Snov_0168 Snov_0168 Snov_0169 Snov_0169 Snov_0170 Snov_0170 Snov_0171 Snov_0171
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Snov_0164KEGG: hypothetical protein. (269 aa)
Snov_0165Integral membrane sensor signal transduction histidine kinase; KEGG: ccs:CCNA_01239 two-component sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein. (481 aa)
Snov_0166Two component transcriptional regulator, winged helix family; KEGG: pzu:PHZ_c1903 response regulator(with CheY-like receiver domain and winged-helix DNA-binding domain); PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver. (232 aa)
Snov_0168KEGG: azc:AZC_2752 hypothetical protein. (186 aa)
Snov_0169KEGG: ara:Arad_8431 isoprenylcysteine carboxyl methyltransferase protein. (222 aa)
Snov_0170KEGG: mva:Mvan_4730 hypothetical protein. (142 aa)
Snov_0171KEGG: bja:bll3994 hypothetical protein. (154 aa)
Your Current Organism:
Starkeya novella
NCBI taxonomy Id: 639283
Other names: S. novella DSM 506, Starkeya novella DSM 506, Starkeya novella IAM 12100, Starkeya novella str. DSM 506, Starkeya novella strain DSM 506
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