STRINGSTRING
Snov_1182 Snov_1182 Snov_1188 Snov_1188 Snov_1189 Snov_1189 Snov_1190 Snov_1190 Snov_1192 Snov_1192 Snov_1193 Snov_1193 Snov_1194 Snov_1194 Snov_1195 Snov_1195 Snov_3709 Snov_3709 Snov_3742 Snov_3742
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Snov_1182KEGG: azc:AZC_1459 hypothetical protein. (63 aa)
Snov_1188PFAM: phosphoribosyltransferase; KEGG: aeh:Mlg_1733 phosphoribosyltransferase. (220 aa)
Snov_1189KEGG: cak:Caul_4233 erythromycin esterase. (239 aa)
Snov_1190KEGG: pzu:PHZ_c0645 hypothetical protein. (351 aa)
Snov_1192PFAM: UspA domain protein; KEGG: bbr:BB2667 putative universal stress protein. (145 aa)
Snov_1193KEGG: bbt:BBta_2092 hypothetical protein. (146 aa)
Snov_1194KEGG: nha:Nham_1933 CBS domain-containing protein; PFAM: CBS domain containing protein; transport-associated; SMART: CBS domain containing protein. (228 aa)
Snov_1195PFAM: transport-associated; KEGG: hypothetical protein. (77 aa)
Snov_3709PFAM: aminoglycoside phosphotransferase; KEGG: azc:AZC_1165 putative kinase. (513 aa)
Snov_3742PFAM: phosphoribosyltransferase; KEGG: aeh:Mlg_1733 phosphoribosyltransferase. (220 aa)
Your Current Organism:
Starkeya novella
NCBI taxonomy Id: 639283
Other names: S. novella DSM 506, Starkeya novella DSM 506, Starkeya novella IAM 12100, Starkeya novella str. DSM 506, Starkeya novella strain DSM 506
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.