STRINGSTRING
Snov_0379 Snov_0379 Snov_0380 Snov_0380 Snov_0391 Snov_0391 Snov_0524 Snov_0524 Snov_0525 Snov_0525 Snov_0528 Snov_0528 Snov_0531 Snov_0531 Snov_0532 Snov_0532 Snov_0551 Snov_0551 Snov_0554 Snov_0554 Snov_0683 Snov_0683 Snov_0684 Snov_0684 Snov_0685 Snov_0685 Snov_0686 Snov_0686 Snov_0841 Snov_0841 Snov_1201 Snov_1201 Snov_1202 Snov_1202 Snov_1214 Snov_1214 Snov_1215 Snov_1215 Snov_1217 Snov_1217 Snov_1218 Snov_1218 Snov_1305 Snov_1305 Snov_1422 Snov_1422 Snov_1552 Snov_1552 Snov_2677 Snov_2677 Snov_2680 Snov_2680 Snov_2681 Snov_2681 Snov_2682 Snov_2682 Snov_2683 Snov_2683 Snov_2760 Snov_2760 Snov_2761 Snov_2761 Snov_2934 Snov_2934 Snov_2935 Snov_2935 Snov_2936 Snov_2936 Snov_2937 Snov_2937 Snov_2938 Snov_2938 Snov_2939 Snov_2939 Snov_3012 Snov_3012 Snov_3019 Snov_3019 Snov_3193 Snov_3193 Snov_3228 Snov_3228 Snov_3457 Snov_3457 Snov_3458 Snov_3458 Snov_3659 Snov_3659 Snov_3751 Snov_3751 Snov_3777 Snov_3777 Snov_4319 Snov_4319
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Snov_0379PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rle:RL1231 short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (275 aa)
Snov_0380KEGG: bid:Bind_1549 AraC family transcriptional regulator; PFAM: AraC-type transcriptional regulator domain protein; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain. (304 aa)
Snov_0391KEGG: oan:Oant_2921 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; SMART: Helix-turn-helix, AraC domain. (321 aa)
Snov_0524Transcriptional regulator, AraC family; KEGG: scl:sce1410 putative AraC-like transcription regulator; PFAM: helix-turn-helix- domain containing protein AraC type; protein of unknown function DUF861 cupin_3; SMART: Helix-turn-helix, AraC domain. (303 aa)
Snov_0525PFAM: short-chain dehydrogenase/reductase SDR; KEGG: scl:sce1411 putative dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (247 aa)
Snov_0528KEGG: rlt:Rleg2_2054 putative hydrolase protein. (255 aa)
Snov_0531KEGG: bpt:Bpet4107 putative ATPase with chaperone activity. (97 aa)
Snov_0532Transcriptional regulator, winged helix family; PFAM: transcriptional regulator domain protein; NB-ARC domain protein; KEGG: bja:blr6255 hypothetical protein. (979 aa)
Snov_0551KEGG: mdi:METDI4456 beta-lactamase-like. (305 aa)
Snov_0554Transcriptional regulator, AraC family; KEGG: bja:blr5120 transcriptional regulatory protein; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain. (316 aa)
Snov_0683PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: vap:Vapar_5738 glyoxalase/bleomycin resistance protein/dioxygenase. (138 aa)
Snov_0684KEGG: vap:Vapar_5737 transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain. (162 aa)
Snov_0685PFAM: protein of unknown function DUF6 transmembrane; KEGG: mlo:mlr2632 hypothetical protein. (299 aa)
Snov_0686KEGG: mmr:Mmar10_1640 hypothetical protein. (108 aa)
Snov_0841KEGG: mlo:mlr4907 AraC/XylS family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain. (330 aa)
Snov_1201KEGG: rle:RL3566 AraC family transcriptional regulator; PFAM: ThiJ/PfpI domain protein; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain. (336 aa)
Snov_1202PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: mno:Mnod_2288 metal dependent phosphohydrolase. (212 aa)
Snov_1214PFAM: major royal jelly protein; KEGG: bxe:Bxe_A2687 hypothetical protein. (365 aa)
Snov_1215PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: dba:Dbac_2124 alcohol dehydrogenase zinc-binding domain protein. (328 aa)
Snov_1217PFAM: protein of unknown function DUF336; KEGG: rhi:NGR_b16660 hypothetical protein. (149 aa)
Snov_1218PFAM: major royal jelly protein; KEGG: mea:Mex_2p1223 hypothetical protein. (372 aa)
Snov_1305Transcriptional regulator, AraC family; KEGG: mmw:Mmwyl1_2496 helix-turn-helix domain-containing protein; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain. (309 aa)
Snov_1422PFAM: alpha/beta hydrolase fold; KEGG: rle:RL2912 hypothetical protein. (258 aa)
Snov_1552PFAM: alpha/beta hydrolase fold; KEGG: Esterase PIR7B, putative. (251 aa)
Snov_2677PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mva:Mvan_5759 short-chain dehydrogenase/reductase SDR. (308 aa)
Snov_2680PFAM: Cupin 2 conserved barrel domain protein; KEGG: mno:Mnod_7642 cupin 2 conserved barrel domain protein. (145 aa)
Snov_2681PFAM: dTDP-4-dehydrorhamnose reductase; KEGG: bph:Bphy_5577 NmrA family protein. (254 aa)
Snov_2682KEGG: rhi:NGR_b04790 putative transcriptional regulator protein, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain. (286 aa)
Snov_2683PFAM: NmrA family protein; KEGG: bmj:BMULJ_04545 fusion protein of NAD-dependent epimerase/dehydratase and GCN5-related N-acetyltransferase. (255 aa)
Snov_2760KEGG: pmy:Pmen_3214 AraC family transcriptional regulator; PFAM: AraC-type transcriptional regulator domain protein; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain. (294 aa)
Snov_2761PFAM: short-chain dehydrogenase/reductase SDR; KEGG: pla:Plav_2395 short-chain dehydrogenase/reductase SDR. (251 aa)
Snov_2934Transcriptional regulator, winged helix family; KEGG: rle:pRL110133 putative adenylate cyclase/transcriptional regulator; PFAM: transcriptional regulator domain protein; SMART: AAA ATPase. (968 aa)
Snov_2935PFAM: isochorismatase hydrolase; KEGG: rlt:Rleg2_5191 isochorismatase hydrolase. (214 aa)
Snov_2936KEGG: rlt:Rleg2_5190 hypothetical protein. (174 aa)
Snov_2937PFAM: alpha/beta hydrolase fold; KEGG: bja:blr6271 hypothetical protein. (283 aa)
Snov_2938Peroxiredoxin, Ohr subfamily; KEGG: bja:blr1196 putative stress-induced protein; TIGRFAM: peroxiredoxin, Ohr subfamily; PFAM: OsmC family protein. (140 aa)
Snov_2939PFAM: Epoxide hydrolase domain protein; alpha/beta hydrolase fold; KEGG: bur:Bcep18194_C7708 epoxide hydrolase. (425 aa)
Snov_3012KEGG: gbe:GbCGDNIH1_0077 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; SMART: Helix-turn-helix, AraC domain. (351 aa)
Snov_3019Transcriptional regulator, AraC family; KEGG: azc:AZC_1175 transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; SMART: Helix-turn-helix, AraC domain. (323 aa)
Snov_3193Transcriptional regulator, AraC family; KEGG: rsp:RSP_3514 transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; SMART: Helix-turn-helix, AraC domain. (368 aa)
Snov_3228KEGG: rhi:NGR_b04790 putative transcriptional regulator protein, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain. (176 aa)
Snov_3457PFAM: NAD-dependent epimerase/dehydratase; KEGG: gvi:glr1439 hypothetical protein. (298 aa)
Snov_3458KEGG: rlt:Rleg2_5085 transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain. (302 aa)
Snov_3659PFAM: alpha/beta hydrolase fold; KEGG: mno:Mnod_0813 alpha/beta hydrolase fold protein. (349 aa)
Snov_3751Transcriptional regulator, AraC family; KEGG: azc:AZC_2279 transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain. (291 aa)
Snov_3777KEGG: mno:Mnod_1034 transcriptional regulator, AraC family; PFAM: ThiJ/PfpI domain protein; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain. (243 aa)
Snov_4319KEGG: ppw:PputW619_3129 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain. (298 aa)
Your Current Organism:
Starkeya novella
NCBI taxonomy Id: 639283
Other names: S. novella DSM 506, Starkeya novella DSM 506, Starkeya novella IAM 12100, Starkeya novella str. DSM 506, Starkeya novella strain DSM 506
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