STRINGSTRING
Snov_2379 Snov_2379 Snov_2380 Snov_2380 Snov_2381 Snov_2381 Snov_2382 Snov_2382 Snov_2383 Snov_2383 Snov_2384 Snov_2384
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Snov_2379KEGG: azc:AZC_2363 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase. (305 aa)
Snov_2380PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: azc:AZC_2362 ABC transporter permease protein. (269 aa)
Snov_2381NMT1/THI5 like domain protein; KEGG: azc:AZC_2361 ABC transporter periplasmic binding protein; PFAM: NMT1/THI5 like domain protein; SMART: extracellular solute-binding protein family 3. (341 aa)
Snov_2382PFAM: homocysteine S-methyltransferase; KEGG: gsu:GSU1327 homocysteine S-methyltransferase domain-containing protein. (313 aa)
Snov_2383KEGG: azc:AZC_4030 hypothetical protein. (94 aa)
Snov_2384PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: mlo:mlr8433 hypothetical protein. (152 aa)
Your Current Organism:
Starkeya novella
NCBI taxonomy Id: 639283
Other names: S. novella DSM 506, Starkeya novella DSM 506, Starkeya novella IAM 12100, Starkeya novella str. DSM 506, Starkeya novella strain DSM 506
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.