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Snov_1255 Snov_1255 Snov_1540 Snov_1540 Snov_1620 Snov_1620 Snov_2136 Snov_2136 Snov_2328 Snov_2328 Snov_2434 Snov_2434 Snov_2488 Snov_2488 Snov_3128 Snov_3128 map map Snov_4193 Snov_4193 Snov_0263 Snov_0263 Snov_0742 Snov_0742 pepA pepA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Snov_1255KEGG: pde:Pden_1126 hypothetical protein. (279 aa)
Snov_1540KEGG: gbe:GbCGDNIH1_1332 membrane-bound protease. (425 aa)
Snov_1620PFAM: peptidase M29 aminopeptidase II; KEGG: mes:Meso_3021 aminopeptidase T. (418 aa)
Snov_2136PFAM: peptidase S58 DmpA; KEGG: azc:AZC_2950 peptidase. (330 aa)
Snov_2328KEGG: xau:Xaut_2828 hypothetical protein. (192 aa)
Snov_2434PFAM: protein of unknown function DUF805; KEGG: cha:CHAB381_1429 hypothetical protein. (128 aa)
Snov_2488PFAM: protein of unknown function DUF58; KEGG: xau:Xaut_2947 hypothetical protein. (317 aa)
Snov_3128KEGG: azc:AZC_0218 aminopeptidase P; PFAM: peptidase M24; creatinase. (610 aa)
mapMethionine aminopeptidase, type I; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily. (275 aa)
Snov_4193KEGG: msl:Msil_0476 hypothetical protein. (286 aa)
Snov_0263KEGG: azc:AZC_0280 leucine aminopeptidase; PFAM: peptidase M17 leucyl aminopeptidase domain protein; Belongs to the peptidase M17 family. (458 aa)
Snov_0742KEGG: xau:Xaut_4749 aminopeptidase N; TIGRFAM: aminopeptidase N; PFAM: Peptidase M1 membrane alanine aminopeptidase. (882 aa)
pepALeucyl aminopeptidase; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides. (502 aa)
Your Current Organism:
Starkeya novella
NCBI taxonomy Id: 639283
Other names: S. novella DSM 506, Starkeya novella DSM 506, Starkeya novella IAM 12100, Starkeya novella str. DSM 506, Starkeya novella strain DSM 506
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