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Snov_0114 Snov_0114 Snov_0116 Snov_0116 gpmA gpmA fbp fbp Snov_0431 Snov_0431 Snov_0560 Snov_0560 Snov_0839 Snov_0839 Snov_1293 Snov_1293 Snov_1366 Snov_1366 Snov_1521 Snov_1521 rbsK rbsK tpiA tpiA kdsA kdsA Snov_2141 Snov_2141 Snov_2159 Snov_2159 pgi pgi Snov_2303 Snov_2303 xylA xylA Snov_3011 Snov_3011 Snov_3070 Snov_3070 Snov_3163 Snov_3163 Snov_3176 Snov_3176 Snov_3257 Snov_3257 zwf zwf Snov_3594 Snov_3594 zwf-2 zwf-2 pckA pckA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Snov_0114PFAM: SMP-30/Gluconolaconase/LRE domain protein; KEGG: bid:Bind_3075 SMP-30/gluconolaconase/LRE domain-containing protein. (309 aa)
Snov_0116Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer. (361 aa)
gpmAPhosphoglycerate mutase 1 family; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate; Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily. (207 aa)
fbpPFAM: Inositol phosphatase/fructose-16-bisphosphatase; KEGG: xau:Xaut_3528 inositol phosphatase/fructose-16-bisphosphatase. (341 aa)
Snov_0431TIGRFAM: ribulose-phosphate 3-epimerase; KEGG: azc:AZC_1810 ribulose-phosphate 3-epimerase; PFAM: ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. (226 aa)
Snov_0560KEGG: bov:BOV_A0474 UDP-glucose 4-epimerase; TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. (328 aa)
Snov_0839FGGY-family pentulose kinase; KEGG: bbt:BBta_0920 putative sugar kinase (ribulo-/ribitol kinase); TIGRFAM: FGGY-family pentulose kinase; PFAM: Carbohydrate kinase, FGGY-like. (547 aa)
Snov_1293TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; KEGG: tmz:Tmz1t_1850 glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. (347 aa)
Snov_1366TIGRFAM: fructose-1,6-bisphosphatase, class II; KEGG: bja:blr4363 fructose 1,6-bisphosphatase II; PFAM: GlpX family protein. (331 aa)
Snov_1521KEGG: met:M446_4343 beta-lactamase domain-containing protein; Belongs to the UPF0173 family. (234 aa)
rbsKPfkB domain protein; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. (315 aa)
tpiATriosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. (251 aa)
kdsAKEGG: xau:Xaut_4203 2-dehydro-3-deoxyphosphooctonate aldolase; TIGRFAM: 2-dehydro-3-deoxyphosphooctonate aldolase; PFAM: DAHP synthetase I/KDSA. (286 aa)
Snov_2141TIGRFAM: ribulose-phosphate 3-epimerase; KEGG: bra:BRADO2842 ribulose-phosphate 3-epimerase (pentose-5-phosphate 3-epimerase) (PPE) (R5P3E); PFAM: ribulose-phosphate 3-epimerase. (228 aa)
Snov_2159KEGG: azc:AZC_1866 hypothetical protein. (278 aa)
pgiKEGG: bov:BOV_0299 glucose-6-phosphate isomerase; PFAM: phosphoglucose isomerase (PGI); Belongs to the GPI family. (547 aa)
Snov_2303KEGG: azc:AZC_0408 hypothetical protein. (275 aa)
xylATIGRFAM: xylose isomerase; KEGG: bra:BRADO2360 xylose isomerase; PFAM: Xylose isomerase domain protein TIM barrel; Belongs to the xylose isomerase family. (439 aa)
Snov_3011TIGRFAM: L-serine dehydratase 1; KEGG: msl:Msil_1803 L-serine dehydratase 1; PFAM: serine dehydratase alpha chain; serine dehydratase beta chain; Belongs to the iron-sulfur dependent L-serine dehydratase family. (454 aa)
Snov_3070TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; KEGG: bid:Bind_3468 glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. (335 aa)
Snov_3163Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. (1154 aa)
Snov_3176PFAM: aldo/keto reductase; KEGG: atc:AGR_L_1141 hypothetical protein. (277 aa)
Snov_3257PFAM: SMP-30/Gluconolaconase/LRE domain protein; KEGG: oan:Oant_3342 SMP-30/gluconolaconase/LRE domain-containing protein. (298 aa)
zwfGlucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone. (491 aa)
Snov_3594PFAM: aldo/keto reductase; KEGG: tbd:Tbd_1200 putative oxidoreductase protein. (305 aa)
zwf-2Glucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone. (513 aa)
pckAPhosphoenolpyruvate carboxykinase (ATP); Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA. (537 aa)
Your Current Organism:
Starkeya novella
NCBI taxonomy Id: 639283
Other names: S. novella DSM 506, Starkeya novella DSM 506, Starkeya novella IAM 12100, Starkeya novella str. DSM 506, Starkeya novella strain DSM 506
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