STRINGSTRING
dut dut Snov_0969 Snov_0969 Snov_1370 Snov_1370 Snov_1775 Snov_1775 surE surE Snov_1891 Snov_1891 Snov_2078 Snov_2078 Snov_4484 Snov_4484
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
dutDeoxyuridine 5'-triphosphate nucleotidohydrolase Dut; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family. (161 aa)
Snov_0969PFAM: 5'-Nucleotidase domain protein; metallophosphoesterase; KEGG: xau:Xaut_1519 5'-nucleotidase domain-containing protein; Belongs to the 5'-nucleotidase family. (564 aa)
Snov_1370KEGG: bja:blr7070 hypothetical protein. (458 aa)
Snov_1775KEGG: xau:Xaut_4391 MazG family protein; TIGRFAM: MazG family protein; PFAM: MazG nucleotide pyrophosphohydrolase. (277 aa)
surEStationary-phase survival protein SurE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. (254 aa)
Snov_1891TIGRFAM: deoxyguanosinetriphosphate triphosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: azc:AZC_2807 deoxyguanosinetriphosphate; SMART: metal-dependent phosphohydrolase HD region; Belongs to the dGTPase family. Type 2 subfamily. (390 aa)
Snov_2078PFAM: FRG domain protein; KEGG: bra:BRADO3625 hypothetical protein. (378 aa)
Snov_4484NAD(+) diphosphatase; KEGG: azc:AZC_0140 MutT/NUDIX family protein; PFAM: NUDIX hydrolase; Zinc ribbon NADH pyrophosphatase; NADH pyrophosphatase-like; Belongs to the Nudix hydrolase family. (324 aa)
Your Current Organism:
Starkeya novella
NCBI taxonomy Id: 639283
Other names: S. novella DSM 506, Starkeya novella DSM 506, Starkeya novella IAM 12100, Starkeya novella str. DSM 506, Starkeya novella strain DSM 506
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