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kduI kduI Snov_3300 Snov_3300 glpK glpK edd edd Snov_4073 Snov_4073 Snov_4074 Snov_4074 Snov_0264 Snov_0264 Snov_4108 Snov_4108 Snov_4184 Snov_4184 Snov_4290 Snov_4290 gpmA gpmA Snov_0362 Snov_0362 Snov_0426 Snov_0426 Snov_0431 Snov_0431 Snov_0471 Snov_0471 Snov_0472 Snov_0472 Snov_0839 Snov_0839 Snov_1168 Snov_1168 Snov_1521 Snov_1521 rbsK rbsK tpiA tpiA eno eno Snov_2141 Snov_2141 Snov_2234 Snov_2234 pgi pgi Snov_2303 Snov_2303 Snov_2767 Snov_2767 Snov_2818 Snov_2818 Snov_3069 Snov_3069 pgk pgk Snov_3072 Snov_3072 Snov_3164 Snov_3164 Snov_3172 Snov_3172 Snov_3205 Snov_3205
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
kduI4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase; Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate. Belongs to the KduI family. (280 aa)
Snov_3300TIGRFAM: 2-oxoglutarate dehydrogenase, E1 subunit; KEGG: xau:Xaut_0156 2-oxoglutarate dehydrogenase E1 component; PFAM: Transketolase central region; dehydrogenase E1 component. (992 aa)
glpKGlycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family. (498 aa)
edd6-phosphogluconate dehydratase; Catalyzes the dehydration of 6-phospho-D-gluconate to 2- dehydro-3-deoxy-6-phospho-D-gluconate; Belongs to the IlvD/Edd family. (612 aa)
Snov_40732-dehydro-3-deoxygalactonokinase; KEGG: met:M446_4620 2-keto-3-deoxy-galactonokinase; PFAM: 2-keto-3-deoxy-galactonokinase. (317 aa)
Snov_4074PFAM: KDPG and KHG aldolase; KEGG: azc:AZC_4410 2-keto-3-deoxy-6-phosphogluconate aldolase. (208 aa)
Snov_0264PFAM: Phosphoglycerate mutase; KEGG: xau:Xaut_4141 phosphoglycerate mutase; Belongs to the phosphoglycerate mutase family. (196 aa)
Snov_4108KEGG: rhi:NGR_b04090 putative PTS-dependent dihydroxyacetone kinase,phosphotransferase subunit; TIGRFAM: dihydroxyacetone kinase, phosphotransfer subunit; PFAM: PTS system fructose subfamily IIA component. (137 aa)
Snov_4184TIGRFAM: glycogen debranching enzyme GlgX; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; KEGG: mei:Msip34_0643 glycogen debranching enzyme GlgX; SMART: alpha amylase catalytic sub domain; Belongs to the glycosyl hydrolase 13 family. (687 aa)
Snov_4290Galactarate dehydratase; KEGG: azc:AZC_3340 altronate hydrolase; PFAM: D-galactarate dehydratase/Altronate hydrolase domain protein; SAF domain protein. (512 aa)
gpmAPhosphoglycerate mutase 1 family; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate; Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily. (207 aa)
Snov_0362KEGG: azc:AZC_0891 glycosyl hydrolase family 2 protein. (428 aa)
Snov_0426Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate. (674 aa)
Snov_0431TIGRFAM: ribulose-phosphate 3-epimerase; KEGG: azc:AZC_1810 ribulose-phosphate 3-epimerase; PFAM: ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. (226 aa)
Snov_0471PFAM: Gluconate transporter; KEGG: tle:Tlet_1725 gluconate transporter. (444 aa)
Snov_0472PFAM: glycoside hydrolase family 5; KEGG: aca:ACP_0988 glycosyl hydrolase, family 5; Belongs to the glycosyl hydrolase 5 (cellulase A) family. (446 aa)
Snov_0839FGGY-family pentulose kinase; KEGG: bbt:BBta_0920 putative sugar kinase (ribulo-/ribitol kinase); TIGRFAM: FGGY-family pentulose kinase; PFAM: Carbohydrate kinase, FGGY-like. (547 aa)
Snov_1168KEGG: bmr:BMI_II228 hypothetical protein. (156 aa)
Snov_1521KEGG: met:M446_4343 beta-lactamase domain-containing protein; Belongs to the UPF0173 family. (234 aa)
rbsKPfkB domain protein; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. (315 aa)
tpiATriosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. (251 aa)
enoEnolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. (427 aa)
Snov_2141TIGRFAM: ribulose-phosphate 3-epimerase; KEGG: bra:BRADO2842 ribulose-phosphate 3-epimerase (pentose-5-phosphate 3-epimerase) (PPE) (R5P3E); PFAM: ribulose-phosphate 3-epimerase. (228 aa)
Snov_2234PFAM: glycoside hydrolase family 18; KEGG: xau:Xaut_1952 hypothetical protein. (316 aa)
pgiKEGG: bov:BOV_0299 glucose-6-phosphate isomerase; PFAM: phosphoglucose isomerase (PGI); Belongs to the GPI family. (547 aa)
Snov_2303KEGG: azc:AZC_0408 hypothetical protein. (275 aa)
Snov_2767KEGG: avi:Avi_5923 pyruvate kinase; PFAM: Pyruvate kinase barrel; Belongs to the pyruvate kinase family. (501 aa)
Snov_2818Glucokinase; KEGG: xau:Xaut_2047 glucokinase; PFAM: Glucokinase; Belongs to the bacterial glucokinase family. (323 aa)
Snov_3069Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate. (663 aa)
pgkKEGG: azc:AZC_0502 phosphoglycerate kinase; PFAM: phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family. (399 aa)
Snov_3072KEGG: xau:Xaut_3077 fructose-bisphosphate aldolase; PFAM: fructose-bisphosphate aldolase class-I. (340 aa)
Snov_3164TIGRFAM: pyruvate kinase; KEGG: azc:AZC_3491 pyruvate kinase; PFAM: Pyruvate kinase barrel; Pyruvate kinase alpha/beta; Belongs to the pyruvate kinase family. (516 aa)
Snov_3172Cellulase; KEGG: ara:Arad_9976 endoglucanase (glycoside hydrolase) protein; PFAM: glycoside hydrolase family 8. (350 aa)
Snov_3205Transketolase domain protein; Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). (791 aa)
Your Current Organism:
Starkeya novella
NCBI taxonomy Id: 639283
Other names: S. novella DSM 506, Starkeya novella DSM 506, Starkeya novella IAM 12100, Starkeya novella str. DSM 506, Starkeya novella strain DSM 506
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