STRINGSTRING
Snov_0862 Snov_0862 Snov_4174 Snov_4174 Snov_4173 Snov_4173 Snov_3678 Snov_3678 Snov_3597 Snov_3597 rutF rutF Snov_3092 Snov_3092 proC proC Snov_2322 Snov_2322 Snov_2128 Snov_2128 Snov_2052 Snov_2052 queF queF Snov_1408 Snov_1408 folD folD Snov_0195 Snov_0195 Snov_0154 Snov_0154
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Snov_0862KEGG: smt:Smal_2040 FMN reductase; PFAM: NADPH-dependent FMN reductase. (203 aa)
Snov_4174PFAM: flavin reductase domain protein FMN-binding; KEGG: xau:Xaut_1212 flavin reductase domain-containing protein. (173 aa)
Snov_4173PFAM: flavin reductase domain protein FMN-binding; KEGG: psa:PST_3602 NAD(P)H-flavin oxidoreductase. (180 aa)
Snov_3678PFAM: bifunctional deaminase-reductase domain protein; KEGG: rhi:NGR_c22230 putative reductase protein. (176 aa)
Snov_3597KEGG: mpo:Mpop_4405 dihydrofolate reductase. (135 aa)
rutFFlavin reductase domain protein FMN-binding protein; Catalyzes the reduction of FMN to FMNH2 which is used to reduce pyrimidine by RutA via the Rut pathway; Belongs to the non-flavoprotein flavin reductase family. RutF subfamily. (181 aa)
Snov_3092Dihydrofolate reductase; Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis. (169 aa)
proCPyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline. (373 aa)
Snov_2322TIGRFAM: 5,10-methylenetetrahydrofolate reductase; KEGG: azc:AZC_4340 5,10-methylenetetrahydrofolate reductase; PFAM: methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family. (308 aa)
Snov_2128PFAM: flavin reductase domain protein FMN-binding; KEGG: msl:Msil_2080 flavin reductase domain protein FMN-binding. (172 aa)
Snov_2052PFAM: flavin reductase domain protein FMN-binding; KEGG: mes:Meso_2385 flavin reductase-like, FMN-binding. (176 aa)
queF7-cyano-7-deazaguanine reductase; Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1). Belongs to the GTP cyclohydrolase I family. QueF type 1 subfamily. (153 aa)
Snov_1408PFAM: flavin reductase domain protein FMN-binding; KEGG: xau:Xaut_1646 hypothetical protein. (199 aa)
folDMethenyltetrahydrofolate cyclohydrolase; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate. (290 aa)
Snov_0195PFAM: flavin reductase domain protein FMN-binding; KEGG: nfa:nfa12490 putative oxygenase. (185 aa)
Snov_0154Malate/L-lactate dehydrogenase; Catalyzes the reduction of Delta(1)-pyrroline-2-carboxylate (Pyr2C) to L-proline, using NADPH as the electron donor. Is likely involved in a degradation pathway that converts cis- and trans-3- hydroxy-L-proline (c3LHyp and t3LHyp) to L-proline, which would allow S.novella to grow on c3LHyp or t3LHyp as a sole carbon source. (341 aa)
Your Current Organism:
Starkeya novella
NCBI taxonomy Id: 639283
Other names: S. novella DSM 506, Starkeya novella DSM 506, Starkeya novella IAM 12100, Starkeya novella str. DSM 506, Starkeya novella strain DSM 506
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