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Snov_0589 Snov_0589 Snov_0619 Snov_0619 Snov_0620 Snov_0620 Snov_0622 Snov_0622 Snov_1016 Snov_1016 nuoN nuoN Snov_1851 Snov_1851 Snov_1852 Snov_1852 nuoK nuoK Snov_1858 Snov_1858 Snov_1860 Snov_1860 Snov_2022 Snov_2022 Snov_2107 Snov_2107 Snov_2176 Snov_2176 Snov_0585 Snov_0585 Snov_4243 Snov_4243 Snov_4242 Snov_4242 Snov_4241 Snov_4241 Snov_3851 Snov_3851 Snov_3750 Snov_3750 Snov_3737 Snov_3737 Snov_3706 Snov_3706 Snov_3536 Snov_3536 Snov_2408 Snov_2408 Snov_3535 Snov_3535 Snov_3506 Snov_3506 Snov_3189 Snov_3189 Snov_2753 Snov_2753 Snov_2478 Snov_2478
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Snov_0589KEGG: xau:Xaut_4643 cytochrome c oxidase subunit III; PFAM: cytochrome c oxidase subunit III. (278 aa)
Snov_0619KEGG: xau:Xaut_1267 cytochrome d ubiquinol oxidase, subunit II; TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase subunit II. (340 aa)
Snov_0620PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: xau:Xaut_1268 cytochrome bd ubiquinol oxidase subunit I. (469 aa)
Snov_0622Electron-transferring-flavoprotein dehydrogenase; Accepts electrons from ETF and reduces ubiquinone. (561 aa)
Snov_1016TIGRFAM: cytochrome c oxidase, subunit I; KEGG: noc:Noc_1766 cytochrome c oxidase; PFAM: cytochrome c oxidase subunit I; Belongs to the heme-copper respiratory oxidase family. (834 aa)
nuoNProton-translocating NADH-quinone oxidoreductase, chain N; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 2 family. (475 aa)
Snov_1851TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; KEGG: xau:Xaut_4621 proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I). (504 aa)
Snov_1852TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; KEGG: xau:Xaut_4622 proton-translocating NADH-quinone oxidoreductase, chain L; PFAM: NADH/Ubiquinone/plastoquinone (complex I); NADH-Ubiquinone oxidoreductase (complex I) chain 5/L domain protein; NADH dehydrogenase subunit 5 domain protein. (642 aa)
nuoKNADH-ubiquinone oxidoreductase chain 4L; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 4L family. (102 aa)
Snov_1858NADH-quinone oxidoreductase, chain G; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. Belongs to the complex I 75 kDa subunit family. (693 aa)
Snov_1860TIGRFAM: NADH-quinone oxidoreductase, E subunit; KEGG: rpt:Rpal_3295 NADH dehydrogenase subunit E; PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit. (290 aa)
Snov_2022PFAM: transglutaminase family protein cysteine peptidase BTLCP; KEGG: azc:AZC_3670 putative transglutaminase-like cysteine peptidase. (196 aa)
Snov_2107PFAM: cytochrome B561; KEGG: bid:Bind_0113 cytochrome b561. (234 aa)
Snov_2176KEGG: rlg:Rleg_2569 cytochrome b561. (279 aa)
Snov_0585Cytochrome c oxidase, subunit I; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. (530 aa)
Snov_4243PFAM: cytochrome c oxidase subunit III; KEGG: bja:bll3782 cytochrome c oxidase. (240 aa)
Snov_4242PFAM: cytochrome c oxidase subunit III; KEGG: mlo:mlr1042 cytochrome c oxidase subunit III. (241 aa)
Snov_4241TIGRFAM: cytochrome c oxidase, subunit I; KEGG: rhi:NGR_c25530 cytochrome c oxidase polypeptide I/III; PFAM: cytochrome c oxidase subunit I; Belongs to the heme-copper respiratory oxidase family. (590 aa)
Snov_3851KEGG: xau:Xaut_3479 formate dehydrogenase, alpha subunit; TIGRFAM: formate dehydrogenase, alpha subunit; PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding; ferredoxin; 4Fe-4S ferredoxin iron-sulfur binding domain protein; molydopterin dinucleotide-binding region. (951 aa)
Snov_3750PFAM: cytochrome B561; KEGG: bid:Bind_1272 cytochrome b561. (194 aa)
Snov_3737PFAM: cytochrome B561; KEGG: mno:Mnod_0252 cytochrome b561. (187 aa)
Snov_3706PFAM: cytochrome B561; KEGG: bpy:Bphyt_5858 cytochrome b561. (158 aa)
Snov_3536KEGG: rpb:RPB_0206 cytochrome bd ubiquinol oxidase, subunit II; TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase subunit II. (346 aa)
Snov_2408NADH dehydrogenase (quinone); KEGG: oan:Oant_3533 putative monovalent cation/H+ antiporter subunit D; PFAM: NADH/Ubiquinone/plastoquinone (complex I). (554 aa)
Snov_3535PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: rpb:RPB_0205 cytochrome bd ubiquinol oxidase, subunit I. (474 aa)
Snov_3506TIGRFAM: formate dehydrogenase, gamma subunit; KEGG: azc:AZC_1157 formate dehydrogenase gamma subunit. (237 aa)
Snov_3189PFAM: cytochrome B561; KEGG: cak:Caul_2422 cytochrome b561. (192 aa)
Snov_2753PFAM: cytochrome B561; KEGG: xau:Xaut_1186 cytochrome b561. (186 aa)
Snov_2478Cytochrome b/b6 domain protein; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. (424 aa)
Your Current Organism:
Starkeya novella
NCBI taxonomy Id: 639283
Other names: S. novella DSM 506, Starkeya novella DSM 506, Starkeya novella IAM 12100, Starkeya novella str. DSM 506, Starkeya novella strain DSM 506
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