STRINGSTRING
Snov_0214 Snov_0214 Snov_0222 Snov_0222 Snov_0401 Snov_0401 Snov_0851 Snov_0851 Snov_0855 Snov_0855 Snov_0859 Snov_0859 ssuB ssuB Snov_0868 Snov_0868 Snov_1049 Snov_1049 Snov_2379 Snov_2379 Snov_2840 Snov_2840 Snov_3375 Snov_3375 Snov_4132 Snov_4132 Snov_4144 Snov_4144 Snov_4276 Snov_4276
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Snov_0214KEGG: ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase. (266 aa)
Snov_0222ABC transporter related protein; KEGG: rci:RCIX444 putative ABC-type sulfonate import system, ATPase component; PFAM: ABC transporter related; SMART: AAA ATPase. (276 aa)
Snov_0401TIGRFAM: nitrate ABC transporter, ATPase subunits C and D; PFAM: ABC transporter related; KEGG: azc:AZC_0684 nitrate transport ATP-binding subunits C and D protein; SMART: AAA ATPase. (264 aa)
Snov_0851KEGG: bra:BRADO4271 putative sulfonate ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase. (242 aa)
Snov_0855KEGG: rpf:Rpic12D_2478 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase. (257 aa)
Snov_0859KEGG: msl:Msil_0769 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase. (252 aa)
ssuBABC transporter related protein; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system. (260 aa)
Snov_0868KEGG: bvi:Bcep1808_4968 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase. (290 aa)
Snov_1049KEGG: tmz:Tmz1t_2850 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase. (241 aa)
Snov_2379KEGG: azc:AZC_2363 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase. (305 aa)
Snov_2840KEGG: mlo:mll1293 ATP-binding protein of ABC transporter; PFAM: ABC transporter related; SMART: AAA ATPase. (257 aa)
Snov_3375KEGG: bra:BRADO6796 putative ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase. (278 aa)
Snov_4132KEGG: bra:BRADO5374 putative ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase. (275 aa)
Snov_4144KEGG: mvu:Metvu_0823 ABC transporter releated protein; PFAM: ABC transporter related; SMART: AAA ATPase. (268 aa)
Snov_4276KEGG: met:M446_3499 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase. (262 aa)
Your Current Organism:
Starkeya novella
NCBI taxonomy Id: 639283
Other names: S. novella DSM 506, Starkeya novella DSM 506, Starkeya novella IAM 12100, Starkeya novella str. DSM 506, Starkeya novella strain DSM 506
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