STRINGSTRING
Snov_2664 Snov_2664 Snov_2650 Snov_2650 Snov_2652 Snov_2652 Snov_2661 Snov_2661
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Snov_2664KEGG: tye:THEYE_A1697 type I site-specific deoxyribonuclease; PFAM: type III restriction protein res subunit; protein of unknown function DUF450; SMART: DEAD-like helicase. (912 aa)
Snov_2650PFAM: restriction modification system DNA specificity domain; KEGG: gox:GOX2568 type I restriction-modification enzyme S subunit. (392 aa)
Snov_2652KEGG: pla:Plav_2348 type I restriction-modification system, M subunit; TIGRFAM: type I restriction-modification system, M subunit; PFAM: N-6 DNA methylase. (505 aa)
Snov_2661Site-specific DNA-methyltransferase (adenine-specific); KEGG: rci:RCIX1317 type I restriction modification system, methyltransferase subunit; PFAM: N-6 DNA methylase. (482 aa)
Your Current Organism:
Starkeya novella
NCBI taxonomy Id: 639283
Other names: S. novella DSM 506, Starkeya novella DSM 506, Starkeya novella IAM 12100, Starkeya novella str. DSM 506, Starkeya novella strain DSM 506
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