STRINGSTRING
Snov_0449 Snov_0449 Snov_0450 Snov_0450 Snov_2770 Snov_2770
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Snov_0449TIGRFAM: methylmalonyl-CoA mutase, large subunit; KEGG: azc:AZC_1772 methylmalonyl-CoA mutase; PFAM: methylmalonyl-CoA mutase; cobalamin B12-binding domain protein. (722 aa)
Snov_0450KEGG: azc:AZC_1773 putative methylmalonyl-CoA mutase; PFAM: methylmalonyl-CoA mutase. (618 aa)
Snov_2770TIGRFAM: methylmalonyl-CoA mutase, large subunit; KEGG: xau:Xaut_5021 methylmalonyl-CoA mutase, large subunit; PFAM: methylmalonyl-CoA mutase. (568 aa)
Your Current Organism:
Starkeya novella
NCBI taxonomy Id: 639283
Other names: S. novella DSM 506, Starkeya novella DSM 506, Starkeya novella IAM 12100, Starkeya novella str. DSM 506, Starkeya novella strain DSM 506
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