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xerC xerC Snov_2961 Snov_2961 xerC-2 xerC-2 Snov_4124 Snov_4124 Snov_4352 Snov_4352 Snov_4498 Snov_4498 Snov_4369 Snov_4369 Snov_0609 Snov_0609 Snov_0871 Snov_0871 Snov_1928 Snov_1928 Snov_1965 Snov_1965 Snov_2057 Snov_2057 Snov_2641 Snov_2641
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
xerCIntegrase family protein; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids. (334 aa)
Snov_2961PFAM: integrase family protein; KEGG: xau:Xaut_0792 integrase family protein; Belongs to the 'phage' integrase family. (413 aa)
xerC-2Integrase family protein; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids. (328 aa)
Snov_4124KEGG: azc:AZC_2284 topoisomerase IB. (374 aa)
Snov_4352PFAM: integrase family protein; KEGG: avi:Avi_0710 integrase protein. (362 aa)
Snov_4498PFAM: integrase family protein; KEGG: nwi:Nwi_1140 phage integrase. (400 aa)
Snov_4369PFAM: integrase family protein; KEGG: mno:Mnod_6823 integrase family protein. (434 aa)
Snov_0609KEGG: mno:Mnod_7504 integrase family protein; Belongs to the 'phage' integrase family. (538 aa)
Snov_0871PFAM: integrase family protein; KEGG: pde:Pden_1421 phage integrase family protein. (353 aa)
Snov_1928PFAM: integrase family protein; KEGG: mlo:mll6432 symbiosis island integrase; Belongs to the 'phage' integrase family. (423 aa)
Snov_1965PFAM: integrase family protein; KEGG: smd:Smed_1348 phage integrase family protein; Belongs to the 'phage' integrase family. (392 aa)
Snov_2057PFAM: integrase family protein; KEGG: nha:Nham_2470 phage integrase; Belongs to the 'phage' integrase family. (563 aa)
Snov_2641PFAM: integrase family protein; KEGG: mno:Mnod_7637 integrase family protein; Belongs to the 'phage' integrase family. (458 aa)
Your Current Organism:
Starkeya novella
NCBI taxonomy Id: 639283
Other names: S. novella DSM 506, Starkeya novella DSM 506, Starkeya novella IAM 12100, Starkeya novella str. DSM 506, Starkeya novella strain DSM 506
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