STRINGSTRING
glsA glsA Snov_0677 Snov_0677 Snov_0689 Snov_0689 Snov_0944 Snov_0944 Snov_1334 Snov_1334 Snov_1493 Snov_1493 Snov_1769 Snov_1769 Snov_3151 Snov_3151 Snov_3291 Snov_3291 Snov_3686 Snov_3686 Snov_4480 Snov_4480 Snov_4497 Snov_4497
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
glsAGlutaminase; KEGG: rpd:RPD_1383 glutaminase; PFAM: Glutaminase, core; Belongs to the glutaminase family. (327 aa)
Snov_0677KEGG: xau:Xaut_1653 1A family penicillin-binding protein; TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase. (749 aa)
Snov_0689PFAM: beta-lactamase; KEGG: mlo:mll2003 hypothetical protein. (508 aa)
Snov_0944KEGG: xau:Xaut_3260 penicillin-binding protein 1C; TIGRFAM: penicillin-binding protein 1C; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; Penicillin-binding domain protein. (701 aa)
Snov_1334KEGG: azc:AZC_3625 penicillin-binding protein 1A precursor; TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase. (812 aa)
Snov_1493KEGG: xau:Xaut_4539 serine-type D-Ala-D-Ala carboxypeptidase; PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Sporulation domain protein; Belongs to the peptidase S11 family. (570 aa)
Snov_1769KEGG: mrd:Mrad2831_1507 serine-type D-Ala-D-Ala carboxypeptidase; PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein; Belongs to the peptidase S11 family. (414 aa)
Snov_3151KEGG: xau:Xaut_1850 peptidoglycan glycosyltransferase; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain. (604 aa)
Snov_3291KEGG: azc:AZC_1002 serine-type D-Ala-D-Ala carboxypeptidase; PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Belongs to the peptidase S11 family. (461 aa)
Snov_3686PFAM: beta-lactamase; KEGG: rru:Rru_A1250 beta-lactamase. (354 aa)
Snov_4480Beta-lactamase; KEGG: rsp:RSP_3749 beta-lactamase; PFAM: beta-lactamase. (384 aa)
Snov_4497KEGG: xau:Xaut_0362 1A family penicillin-binding protein; TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase. (722 aa)
Your Current Organism:
Starkeya novella
NCBI taxonomy Id: 639283
Other names: S. novella DSM 506, Starkeya novella DSM 506, Starkeya novella IAM 12100, Starkeya novella str. DSM 506, Starkeya novella strain DSM 506
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