STRINGSTRING
Snov_4242 Snov_4242 Snov_4243 Snov_4243 Snov_0589 Snov_0589
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Snov_4242PFAM: cytochrome c oxidase subunit III; KEGG: mlo:mlr1042 cytochrome c oxidase subunit III. (241 aa)
Snov_4243PFAM: cytochrome c oxidase subunit III; KEGG: bja:bll3782 cytochrome c oxidase. (240 aa)
Snov_0589KEGG: xau:Xaut_4643 cytochrome c oxidase subunit III; PFAM: cytochrome c oxidase subunit III. (278 aa)
Your Current Organism:
Starkeya novella
NCBI taxonomy Id: 639283
Other names: S. novella DSM 506, Starkeya novella DSM 506, Starkeya novella IAM 12100, Starkeya novella str. DSM 506, Starkeya novella strain DSM 506
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