STRINGSTRING
Snov_2396 Snov_2396 Snov_0111 Snov_0111 Snov_0121 Snov_0121 Snov_0122 Snov_0122 Snov_0286 Snov_0286 Snov_1384 Snov_1384 Snov_1385 Snov_1385 Snov_1563 Snov_1563 Snov_1564 Snov_1564 Snov_1645 Snov_1645 Snov_1706 Snov_1706 Snov_1707 Snov_1707 Snov_2129 Snov_2129 Snov_2130 Snov_2130 Snov_2305 Snov_2305 Snov_2306 Snov_2306 Snov_2397 Snov_2397 Snov_2421 Snov_2421 Snov_2422 Snov_2422 Snov_2544 Snov_2544 Snov_2625 Snov_2625 Snov_2626 Snov_2626 Snov_2928 Snov_2928 Snov_2929 Snov_2929 Snov_3232 Snov_3232 Snov_3233 Snov_3233 Snov_3247 Snov_3247 Snov_3248 Snov_3248 Snov_3557 Snov_3557 Snov_3600 Snov_3600 Snov_3601 Snov_3601 Snov_3669 Snov_3669 Snov_3670 Snov_3670 Snov_4083 Snov_4083 Snov_4084 Snov_4084 Snov_4136 Snov_4136 Snov_4137 Snov_4137 Snov_4221 Snov_4221 Snov_4222 Snov_4222
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Snov_2396PFAM: inner-membrane translocator; KEGG: oca:OCAR_6860 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family. (338 aa)
Snov_0111PFAM: inner-membrane translocator; KEGG: bid:Bind_3072 monosaccharide-transporting ATPase; Belongs to the binding-protein-dependent transport system permease family. (396 aa)
Snov_0121PFAM: inner-membrane translocator; KEGG: bbt:BBta_2130 inner membrane ABC transporter permease protein YjfF; Belongs to the binding-protein-dependent transport system permease family. (331 aa)
Snov_0122PFAM: inner-membrane translocator; KEGG: bja:blr3202 sugar ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family. (332 aa)
Snov_0286PFAM: inner-membrane translocator; KEGG: bbr:BB1773 putative permease component of branched-chain amino acid transport system. (632 aa)
Snov_1384KEGG: azc:AZC_1759 ABC transporter permease protein precursor; TIGRFAM: urea ABC transporter, permease protein UrtB; PFAM: inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family. (539 aa)
Snov_1385KEGG: rpt:Rpal_4189 UreA ABC transporter, permease protein UrtC; TIGRFAM: urea ABC transporter, permease protein UrtC; PFAM: inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family. (388 aa)
Snov_1563PFAM: inner-membrane translocator; KEGG: rhi:NGR_b01280 putative ABC transporter, permease subunit; Belongs to the binding-protein-dependent transport system permease family. (338 aa)
Snov_1564PFAM: inner-membrane translocator; KEGG: sit:TM1040_3252 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family. (341 aa)
Snov_1645PFAM: inner-membrane translocator; KEGG: azc:AZC_1542 putative branched-chain amino acid ABC-type transport permease component; Belongs to the binding-protein-dependent transport system permease family. (447 aa)
Snov_1706PFAM: inner-membrane translocator; KEGG: bra:BRADO1746 ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family. (358 aa)
Snov_1707PFAM: inner-membrane translocator; KEGG: rpd:RPD_1119 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family. (307 aa)
Snov_2129PFAM: inner-membrane translocator; KEGG: xau:Xaut_3900 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family. (305 aa)
Snov_2130PFAM: inner-membrane translocator; KEGG: xau:Xaut_3901 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family. (481 aa)
Snov_2305PFAM: inner-membrane translocator; KEGG: sil:SPO2805 sugar ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family. (314 aa)
Snov_2306PFAM: inner-membrane translocator; KEGG: met:M446_0935 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family. (355 aa)
Snov_2397PFAM: inner-membrane translocator; KEGG: oca:OCAR_6861 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family. (293 aa)
Snov_2421KEGG: bid:Bind_0977 UreA ABC transporter, permease protein UrtB; TIGRFAM: urea ABC transporter, permease protein UrtB; PFAM: inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family. (308 aa)
Snov_2422KEGG: bid:Bind_0978 UreA ABC transporter, permease protein UrtC; TIGRFAM: urea ABC transporter, permease protein UrtC; PFAM: inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family. (390 aa)
Snov_2544PFAM: inner-membrane translocator; KEGG: mes:Meso_3113 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family. (442 aa)
Snov_2625PFAM: inner-membrane translocator; KEGG: azc:AZC_0197 putative inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family. (305 aa)
Snov_2626PFAM: inner-membrane translocator; KEGG: azc:AZC_0198 branched chain amino acid ABC transporter; Belongs to the binding-protein-dependent transport system permease family. (391 aa)
Snov_2928PFAM: inner-membrane translocator; KEGG: xau:Xaut_1353 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family. (301 aa)
Snov_2929PFAM: inner-membrane translocator; KEGG: xau:Xaut_1354 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family. (311 aa)
Snov_3232PFAM: inner-membrane translocator; KEGG: rpt:Rpal_2664 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family. (290 aa)
Snov_3233PFAM: inner-membrane translocator; KEGG: azc:AZC_3887 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family. (354 aa)
Snov_3247ABC transporter related protein; KEGG: mdi:METDI4402 putative branched-chain amino acid ABC transporter, permease/ATP-binding protein; PFAM: ABC transporter related; inner-membrane translocator; SMART: AAA ATPase; Belongs to the binding-protein-dependent transport system permease family. (609 aa)
Snov_3248PFAM: inner-membrane translocator; KEGG: mdi:METDI4401 putative branched-chain amino acid ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family. (278 aa)
Snov_3557PFAM: inner-membrane translocator; KEGG: rsq:Rsph17025_2684 monosaccharide-transporting ATPase; Belongs to the binding-protein-dependent transport system permease family. (333 aa)
Snov_3600PFAM: inner-membrane translocator; KEGG: xau:Xaut_4061 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family. (291 aa)
Snov_3601KEGG: xau:Xaut_4062 ABC transporter related; PFAM: ABC transporter related; inner-membrane translocator; SMART: AAA ATPase; Belongs to the binding-protein-dependent transport system permease family. (595 aa)
Snov_3669PFAM: inner-membrane translocator; KEGG: mlo:mll7017 ribose ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family. (327 aa)
Snov_3670Inner-membrane translocator; KEGG: mlo:mll7018 ribose ABC transporter, ATP-binding protein; PFAM: inner-membrane translocator; ABC transporter related; SMART: AAA ATPase; Belongs to the binding-protein-dependent transport system permease family. (845 aa)
Snov_4083KEGG: met:M446_6491 ABC transporter related; PFAM: ABC transporter related; inner-membrane translocator; SMART: AAA ATPase; Belongs to the binding-protein-dependent transport system permease family. (584 aa)
Snov_4084PFAM: inner-membrane translocator; KEGG: mrd:Mrad2831_6015 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family. (291 aa)
Snov_4136KEGG: pmy:Pmen_0700 inner-membrane translocator; TIGRFAM: urea ABC transporter, permease protein UrtB; PFAM: inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family. (535 aa)
Snov_4137KEGG: tmz:Tmz1t_3933 UreA ABC transporter, permease protein UrtC; TIGRFAM: urea ABC transporter, permease protein UrtC; PFAM: inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family. (364 aa)
Snov_4221PFAM: inner-membrane translocator; KEGG: met:M446_5695 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family. (292 aa)
Snov_4222PFAM: inner-membrane translocator; KEGG: bja:blr3355 ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family. (344 aa)
Your Current Organism:
Starkeya novella
NCBI taxonomy Id: 639283
Other names: S. novella DSM 506, Starkeya novella DSM 506, Starkeya novella IAM 12100, Starkeya novella str. DSM 506, Starkeya novella strain DSM 506
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