STRINGSTRING
Snov_0116 Snov_0116 gpmA gpmA fbp fbp Snov_0427 Snov_0427 Snov_0582 Snov_0582 Snov_1293 Snov_1293 Snov_1366 Snov_1366 Snov_1669 Snov_1669 Snov_1791 Snov_1791 Snov_1792 Snov_1792 Snov_1793 Snov_1793 pdhA pdhA eno eno tpiA tpiA Snov_2051 Snov_2051 Snov_2250 Snov_2250 pgi pgi Snov_2400 Snov_2400 Snov_2415 Snov_2415 Snov_2767 Snov_2767 acsA acsA Snov_2818 Snov_2818 Snov_3070 Snov_3070 pgk pgk Snov_3072 Snov_3072 Snov_3164 Snov_3164 Snov_3186 Snov_3186 Snov_3205 Snov_3205 Snov_3303 Snov_3303 Snov_3674 Snov_3674 Snov_4007 Snov_4007 Snov_4188 Snov_4188 Snov_4191 Snov_4191 Snov_4280 Snov_4280 Snov_4284 Snov_4284 pckA pckA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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Snov_0116Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer. (361 aa)
gpmAPhosphoglycerate mutase 1 family; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate; Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily. (207 aa)
fbpPFAM: Inositol phosphatase/fructose-16-bisphosphatase; KEGG: xau:Xaut_3528 inositol phosphatase/fructose-16-bisphosphatase. (341 aa)
Snov_0427Fructose-bisphosphate aldolase, class II, Calvin cycle subtype; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis. (361 aa)
Snov_0582KEGG: bja:bll1358 putative hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase. (211 aa)
Snov_1293TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; KEGG: tmz:Tmz1t_1850 glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. (347 aa)
Snov_1366TIGRFAM: fructose-1,6-bisphosphatase, class II; KEGG: bja:blr4363 fructose 1,6-bisphosphatase II; PFAM: GlpX family protein. (331 aa)
Snov_1669PFAM: Aldehyde Dehydrogenase; KEGG: atc:AGR_L_1402 probable aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (514 aa)
Snov_1791KEGG: xau:Xaut_3894 dihydrolipoamide dehydrogenase; TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region. (472 aa)
Snov_1792Pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). (458 aa)
Snov_1793Transketolase central region; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. (472 aa)
pdhAPyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). (361 aa)
enoEnolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. (427 aa)
tpiATriosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. (251 aa)
Snov_2051KEGG: bja:bll7607 putative aldehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase; Belongs to the aldehyde dehydrogenase family. (513 aa)
Snov_2250PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase; KEGG: smd:Smed_2743 phosphoglucomutase. (542 aa)
pgiKEGG: bov:BOV_0299 glucose-6-phosphate isomerase; PFAM: phosphoglucose isomerase (PGI); Belongs to the GPI family. (547 aa)
Snov_2400PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: oca:OCAR_6856 alcohol dehydrogenase class 3. (370 aa)
Snov_2415KEGG: mlo:mll6639 aldehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase; Belongs to the aldehyde dehydrogenase family. (505 aa)
Snov_2767KEGG: avi:Avi_5923 pyruvate kinase; PFAM: Pyruvate kinase barrel; Belongs to the pyruvate kinase family. (501 aa)
acsAacetate/CoA ligase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family. (652 aa)
Snov_2818Glucokinase; KEGG: xau:Xaut_2047 glucokinase; PFAM: Glucokinase; Belongs to the bacterial glucokinase family. (323 aa)
Snov_3070TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; KEGG: bid:Bind_3468 glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. (335 aa)
pgkKEGG: azc:AZC_0502 phosphoglycerate kinase; PFAM: phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family. (399 aa)
Snov_3072KEGG: xau:Xaut_3077 fructose-bisphosphate aldolase; PFAM: fructose-bisphosphate aldolase class-I. (340 aa)
Snov_3164TIGRFAM: pyruvate kinase; KEGG: azc:AZC_3491 pyruvate kinase; PFAM: Pyruvate kinase barrel; Pyruvate kinase alpha/beta; Belongs to the pyruvate kinase family. (516 aa)
Snov_3186KEGG: bmr:BMI_I1066 alcohol dehydrogenase, zinc-containing; TIGRFAM: zinc-binding alcohol dehydrogenase family protein; PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein. (327 aa)
Snov_3205Transketolase domain protein; Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). (791 aa)
Snov_3303KEGG: xau:Xaut_0159 dihydrolipoamide dehydrogenase; TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region. (466 aa)
Snov_3674PFAM: ROK family protein; KEGG: gbe:GbCGDNIH1_0537 polyphosphate glucokinase. (236 aa)
Snov_4007TIGRFAM: pyruvate, phosphate dikinase; KEGG: azc:AZC_0410 pyruvate phosphate dikinase; PFAM: pyruvate phosphate dikinase PEP/pyruvate-binding; PEP-utilising protein mobile region; PEP-utilizing protein; Belongs to the PEP-utilizing enzyme family. (892 aa)
Snov_4188KEGG: mch:Mchl_4518 PQQ-dependent dehydrogenase, methanol/ethanol family; TIGRFAM: PQQ-dependent dehydrogenase, methanol/ethanol family; PFAM: PQQ-dependent enzyme-like; Pyrrolo-quinoline quinone. (634 aa)
Snov_4191Alcohol dehydrogenase (acceptor); KEGG: mpo:Mpop_4629 methanol dehydrogenase beta subunit; PFAM: methanol dehydrogenase beta subunit. (104 aa)
Snov_4280KEGG: bbt:BBta_1974 NAD-dependent aldehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase; Belongs to the aldehyde dehydrogenase family. (482 aa)
Snov_4284PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: msm:MSMEG_6296 5-exo-alcohol dehydrogenase. (375 aa)
pckAPhosphoenolpyruvate carboxykinase (ATP); Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA. (537 aa)
Your Current Organism:
Starkeya novella
NCBI taxonomy Id: 639283
Other names: S. novella DSM 506, Starkeya novella DSM 506, Starkeya novella IAM 12100, Starkeya novella str. DSM 506, Starkeya novella strain DSM 506
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