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Snov_0116 Snov_0116 Snov_0117 Snov_0117 Snov_1902 Snov_1902 Snov_2250 Snov_2250 Snov_2717 Snov_2717 Snov_2818 Snov_2818 Snov_3584 Snov_3584 Snov_4073 Snov_4073 Snov_4074 Snov_4074
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Snov_0116Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer. (361 aa)
Snov_0117PFAM: oxidoreductase domain protein; KEGG: bid:Bind_3077 galactose 1-dehydrogenase. (308 aa)
Snov_1902PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: bja:blr5276 hypothetical protein. (399 aa)
Snov_2250PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase; KEGG: smd:Smed_2743 phosphoglucomutase. (542 aa)
Snov_2717TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; KEGG: xau:Xaut_0389 UTP-glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase. (296 aa)
Snov_2818Glucokinase; KEGG: xau:Xaut_2047 glucokinase; PFAM: Glucokinase; Belongs to the bacterial glucokinase family. (323 aa)
Snov_3584KEGG: azc:AZC_4114 alpha amylase; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain. (533 aa)
Snov_40732-dehydro-3-deoxygalactonokinase; KEGG: met:M446_4620 2-keto-3-deoxy-galactonokinase; PFAM: 2-keto-3-deoxy-galactonokinase. (317 aa)
Snov_4074PFAM: KDPG and KHG aldolase; KEGG: azc:AZC_4410 2-keto-3-deoxy-6-phosphogluconate aldolase. (208 aa)
Your Current Organism:
Starkeya novella
NCBI taxonomy Id: 639283
Other names: S. novella DSM 506, Starkeya novella DSM 506, Starkeya novella IAM 12100, Starkeya novella str. DSM 506, Starkeya novella strain DSM 506
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