STRINGSTRING
Snov_0274 Snov_0274 Snov_0337 Snov_0337 glsA glsA Snov_0414 Snov_0414 Snov_0491 Snov_0491 Snov_0807 Snov_0807 Snov_0935 Snov_0935 purF purF Snov_1245 Snov_1245 pyrB pyrB Snov_1569 Snov_1569 glmS glmS Snov_2033 Snov_2033 Snov_2143 Snov_2143 purQ purQ Snov_2222 Snov_2222 carA carA carB carB Snov_2367 Snov_2367 Snov_2530 Snov_2530 Snov_2713 Snov_2713 Snov_2714 Snov_2714 Snov_2813 Snov_2813 Snov_2897 Snov_2897 Snov_2965 Snov_2965 purA purA argG argG Snov_3368 Snov_3368 argH argH Snov_3651 Snov_3651 Snov_3895 Snov_3895 Snov_4329 Snov_4329 Snov_4334 Snov_4334
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Snov_0274PFAM: aminotransferase class-III; KEGG: mno:Mnod_5513 aminotransferase class-III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (460 aa)
Snov_0337Glutamate--putrescine ligase; KEGG: azc:AZC_4442 glutamine synthetase family protein; PFAM: glutamine synthetase catalytic region. (466 aa)
glsAGlutaminase; KEGG: rpd:RPD_1383 glutaminase; PFAM: Glutaminase, core; Belongs to the glutaminase family. (327 aa)
Snov_0414KEGG: met:M446_4572 glutamate--ammonia ligase; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp. (344 aa)
Snov_0491L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate. (502 aa)
Snov_0807KEGG: oca:OCAR_7071 succinate-semialdehyde dehydrogenase [NADP+] (ssdh); PFAM: Aldehyde Dehydrogenase. (486 aa)
Snov_0935Glutamate--putrescine ligase; KEGG: azc:AZC_3648 putative glutamine synthetase protein; PFAM: glutamine synthetase catalytic region. (469 aa)
purFAmidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine; In the C-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family. (499 aa)
Snov_1245PFAM: Aldehyde Dehydrogenase; KEGG: xau:Xaut_2714 aldehyde dehydrogenase. (476 aa)
pyrBTIGRFAM: aspartate carbamoyltransferase; KEGG: azc:AZC_2851 aspartate carbamoyltransferase catalytic subunit; PFAM: aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. (317 aa)
Snov_1569PFAM: aminotransferase class-III; KEGG: bbt:BBta_1928 aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (459 aa)
glmSGlucosamine/fructose-6-phosphate aminotransferase, isomerizing; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. (608 aa)
Snov_2033Delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. (1276 aa)
Snov_2143KEGG: nwi:Nwi_2167 adenylosuccinate lyase; TIGRFAM: adenylosuccinate lyase; PFAM: fumarate lyase; Adenylosuccinate lyase-like; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. (435 aa)
purQPhosphoribosylformylglycinamidine synthase I; Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP- dependent manner. PurS interacts with PurQ and PurL and is thought to assist i [...] (232 aa)
Snov_2222KEGG: azc:AZC_1601 glutamine synthetase; TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp. (469 aa)
carAKEGG: xau:Xaut_1243 carbamoyl phosphate synthase small subunit; TIGRFAM: carbamoyl-phosphate synthase, small subunit; PFAM: glutamine amidotransferase class-I; Carbamoyl-phosphate synthase small chain; Belongs to the CarA family. (400 aa)
carBKEGG: azc:AZC_1145 carbamoyl-phosphate synthase large subunit; TIGRFAM: carbamoyl-phosphate synthase, large subunit; PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; Carbamoyl-phosphate synthetase large chain oligomerisation; MGS domain protein; Belongs to the CarB family. (1111 aa)
Snov_2367PFAM: aminotransferase class I and II; KEGG: xau:Xaut_2737 aminotransferase class I and II. (400 aa)
Snov_2530PFAM: aminotransferase class V; KEGG: rme:Rmet_5630 aminotransferase, class V. (401 aa)
Snov_2713KEGG: xau:Xaut_0477 glutamate synthase (ferredoxin); PFAM: ferredoxin-dependent glutamate synthase; glutamine amidotransferase class-II; glutamate synthase; glutamate synthase alpha subunit domain protein. (1576 aa)
Snov_2714KEGG: xau:Xaut_0476 glutamate synthase, NADH/NADPH, small subunit; TIGRFAM: glutamate synthase, NADH/NADPH, small subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase. (474 aa)
Snov_2813PFAM: NAD-glutamate dehydrogenase; KEGG: azc:AZC_4508 hypothetical protein. (1618 aa)
Snov_2897KEGG: atc:AGR_L_2660 hypothetical protein; PFAM: Aldehyde Dehydrogenase. (479 aa)
Snov_2965PFAM: aminotransferase class I and II; KEGG: azc:AZC_0558 aspartate aminotransferase. (401 aa)
purAAdenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. (431 aa)
argGTIGRFAM: argininosuccinate synthase; KEGG: xau:Xaut_2013 argininosuccinate synthase; PFAM: argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. (408 aa)
Snov_3368TIGRFAM: succinic semialdehyde dehydrogenase; KEGG: mes:Meso_1323 succinate semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase; Belongs to the aldehyde dehydrogenase family. (480 aa)
argHKEGG: xau:Xaut_1738 argininosuccinate lyase; TIGRFAM: argininosuccinate lyase; PFAM: fumarate lyase. (458 aa)
Snov_3651PFAM: Aldehyde Dehydrogenase; KEGG: rpc:RPC_0104 succinate-semialdehyde dehydrogenase (NAD(P)+); Belongs to the aldehyde dehydrogenase family. (502 aa)
Snov_3895Asparaginase; KEGG: mex:Mext_0900 asparaginase/glutaminase; PFAM: Asparaginase/glutaminase. (329 aa)
Snov_4329KEGG: vei:Veis_4520 succinate-semialdehyde dehydrogenase (NAD(P)(+)); PFAM: Aldehyde Dehydrogenase. (474 aa)
Snov_4334PFAM: Aldehyde Dehydrogenase; KEGG: rhi:NGR_c25860 putative NADP+ dependent succinate-semialdehyde dehydrogenase. (458 aa)
Your Current Organism:
Starkeya novella
NCBI taxonomy Id: 639283
Other names: S. novella DSM 506, Starkeya novella DSM 506, Starkeya novella IAM 12100, Starkeya novella str. DSM 506, Starkeya novella strain DSM 506
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