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Snov_0279 Snov_0279 Snov_0337 Snov_0337 Snov_0399 Snov_0399 Snov_0400 Snov_0400 Snov_0401 Snov_0401 Snov_0403 Snov_0403 Snov_0404 Snov_0404 Snov_0406 Snov_0406 Snov_0414 Snov_0414 Snov_0935 Snov_0935 Snov_1031 Snov_1031 Snov_1147 Snov_1147 Snov_1155 Snov_1155 Snov_1156 Snov_1156 Snov_1158 Snov_1158 napA napA Snov_1175 Snov_1175 Snov_1360 Snov_1360 Snov_2222 Snov_2222 Snov_2425 Snov_2425 Snov_2713 Snov_2713 Snov_2714 Snov_2714 Snov_2813 Snov_2813 Snov_3713 Snov_3713 Snov_4203 Snov_4203
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Snov_0279Carbonate dehydratase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family. (210 aa)
Snov_0337Glutamate--putrescine ligase; KEGG: azc:AZC_4442 glutamine synthetase family protein; PFAM: glutamine synthetase catalytic region. (466 aa)
Snov_0399KEGG: xau:Xaut_2504 nitrate-binding protein NrtA precursor, periplasmic. (445 aa)
Snov_0400KEGG: xau:Xaut_2503 nitrate ABC transporter, inner membrane subunit; TIGRFAM: nitrate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component. (303 aa)
Snov_0401TIGRFAM: nitrate ABC transporter, ATPase subunits C and D; PFAM: ABC transporter related; KEGG: azc:AZC_0684 nitrate transport ATP-binding subunits C and D protein; SMART: AAA ATPase. (264 aa)
Snov_0403PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: azc:AZC_0682 putative nitrite reductase. (420 aa)
Snov_0404TIGRFAM: precorrin-3B synthase; KEGG: xau:Xaut_2499 ferredoxin-nitrite reductase; PFAM: nitrite and sulphite reductase 4Fe-4S region; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein. (597 aa)
Snov_0406PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; molydopterin dinucleotide-binding region; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: xau:Xaut_2497 molybdopterin oxidoreductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. (903 aa)
Snov_0414KEGG: met:M446_4572 glutamate--ammonia ligase; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp. (344 aa)
Snov_0935Glutamate--putrescine ligase; KEGG: azc:AZC_3648 putative glutamine synthetase protein; PFAM: glutamine synthetase catalytic region. (469 aa)
Snov_1031PFAM: carbonic anhydrase; KEGG: mno:Mnod_7305 carbonic anhydrase. (241 aa)
Snov_1147TIGRFAM: nitrite reductase, copper-containing; KEGG: mes:Meso_2243 nitrite reductase, copper-containing; PFAM: multicopper oxidase type 1; multicopper oxidase type 3; Belongs to the multicopper oxidase family. (374 aa)
Snov_1155KEGG: rpt:Rpal_1642 nitric-oxide reductase; PFAM: cytochrome c oxidase subunit I; Belongs to the heme-copper respiratory oxidase family. (449 aa)
Snov_1156KEGG: oan:Oant_4386 cytochrome c class I. (150 aa)
Snov_1158Nitrate reductase cytochrome c-type subunit (NapB); Electron transfer subunit of the periplasmic nitrate reductase complex NapAB; Belongs to the NapB family. (166 aa)
napAPeriplasmic nitrate reductase, large subunit; Catalytic subunit of the periplasmic nitrate reductase complex NapAB. Receives electrons from NapB and catalyzes the reduction of nitrate to nitrite. (831 aa)
Snov_1175Formamidase; KEGG: oca:OCAR_7088 formamidase; PFAM: Acetamidase/Formamidase. (408 aa)
Snov_1360PFAM: carbonic anhydrase; KEGG: mrd:Mrad2831_6116 carbonic anhydrase. (236 aa)
Snov_2222KEGG: azc:AZC_1601 glutamine synthetase; TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp. (469 aa)
Snov_2425Formamidase; KEGG: azc:AZC_4101 formamidase; PFAM: Acetamidase/Formamidase. (409 aa)
Snov_2713KEGG: xau:Xaut_0477 glutamate synthase (ferredoxin); PFAM: ferredoxin-dependent glutamate synthase; glutamine amidotransferase class-II; glutamate synthase; glutamate synthase alpha subunit domain protein. (1576 aa)
Snov_2714KEGG: xau:Xaut_0476 glutamate synthase, NADH/NADPH, small subunit; TIGRFAM: glutamate synthase, NADH/NADPH, small subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase. (474 aa)
Snov_2813PFAM: NAD-glutamate dehydrogenase; KEGG: azc:AZC_4508 hypothetical protein. (1618 aa)
Snov_3713PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: azc:AZC_0072 putative amidohydrolase. (357 aa)
Snov_4203TIGRFAM: carbamate kinase; KEGG: rec:RHECIAT_CH0000126 carbamate kinase; PFAM: aspartate/glutamate/uridylate kinase; Belongs to the carbamate kinase family. (324 aa)
Your Current Organism:
Starkeya novella
NCBI taxonomy Id: 639283
Other names: S. novella DSM 506, Starkeya novella DSM 506, Starkeya novella IAM 12100, Starkeya novella str. DSM 506, Starkeya novella strain DSM 506
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