STRINGSTRING
Srot_0195 Srot_0195 Srot_0196 Srot_0196 Srot_0314 Srot_0314 Srot_0361 Srot_0361 Srot_0380 Srot_0380 Srot_0479 Srot_0479 Srot_0579 Srot_0579 Srot_0839 Srot_0839 Srot_0950 Srot_0950 Srot_1355 Srot_1355 Srot_1372 Srot_1372 Srot_1373 Srot_1373 Srot_1403 Srot_1403 Srot_1404 Srot_1404 Srot_1747 Srot_1747 Srot_1748 Srot_1748 Srot_1749 Srot_1749 Srot_1910 Srot_1910 Srot_1926 Srot_1926 Srot_2079 Srot_2079 Srot_2159 Srot_2159 Srot_2160 Srot_2160 Srot_2162 Srot_2162 Srot_2163 Srot_2163 Srot_2410 Srot_2410 Srot_2414 Srot_2414 Srot_2523 Srot_2523 Srot_2536 Srot_2536 Srot_2537 Srot_2537 Srot_2689 Srot_2689 Srot_2728 Srot_2728 Srot_2729 Srot_2729 Srot_2730 Srot_2730 Srot_2731 Srot_2731 Srot_2824 Srot_2824 Srot_2969 Srot_2969 Srot_2970 Srot_2970
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Srot_0195PFAM: acyl-CoA dehydrogenase domain protein; KEGG: mav:MAV_4914 putative acyl-CoA dehydrogenase. (611 aa)
Srot_0196PFAM: acyl-CoA dehydrogenase domain protein; KEGG: msm:MSMEG_0406 acyl-CoA-dehydrogenase. (611 aa)
Srot_0314PFAM: Enoyl-CoA hydratase/isomerase; KEGG: nfa:nfa32360 enoyl-CoA hydratase. (349 aa)
Srot_0361PFAM: NADH:flavin oxidoreductase/NADH oxidase; FAD- dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: mtb:TBMG_02806 NADPH dependent 2,4-dienoyl- CoA reductase FadH. (693 aa)
Srot_0380PFAM: acyl-CoA dehydrogenase domain protein; KEGG: msm:MSMEG_2130 putative acyl-CoA dehydrogenase. (391 aa)
Srot_0479KEGG: mva:Mvan_2338 lipid-transfer protein; Belongs to the thiolase-like superfamily. Thiolase family. (402 aa)
Srot_0579TIGRFAM: acetyl-CoA acetyltransferase; KEGG: rer:RER_38940 acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (397 aa)
Srot_0839PFAM: AMP-dependent synthetase and ligase; KEGG: nfa:nfa47430 acyl-CoA synthetase. (458 aa)
Srot_0950PFAM: acyl-CoA dehydrogenase domain protein; KEGG: mav:MAV_3616 long-chain specific acyl-CoA dehydrogenase. (381 aa)
Srot_1355PFAM: Enoyl-CoA hydratase/isomerase; KEGG: rop:ROP_63190 enoyl-CoA hydratase/isomerase family protein. (230 aa)
Srot_1372KEGG: rop:ROP_65040 putative ABC transporter ATP- binding protein; PFAM: ABC transporter related; SMART: AAA ATPase. (275 aa)
Srot_1373PFAM: Enoyl-CoA hydratase/isomerase; KEGG: gbr:Gbro_3271 enoyl-CoA hydratase/isomerase. (262 aa)
Srot_1403PFAM: Electron transfer flavoprotein alpha/beta- subunit; KEGG: nfa:nfa42790 putative electron transfer flavoprotein beta subunit. (263 aa)
Srot_1404PFAM: Electron transfer flavoprotein alpha subunit; Electron transfer flavoprotein alpha/beta-subunit; KEGG: rha:RHA1_ro06463 electron transfer flavoprotein alpha-subunit. (318 aa)
Srot_1747PFAM: acyl-CoA dehydrogenase domain protein; KEGG: nfa:nfa44920 putative acyl-CoA dehydrogenase. (455 aa)
Srot_1748PFAM: acyl-CoA dehydrogenase domain protein; KEGG: rer:RER_23000 acyl-CoA dehydrogenase. (382 aa)
Srot_1749PFAM: acyl-CoA dehydrogenase domain protein; KEGG: gbr:Gbro_3463 acyl-CoA dehydrogenase domain protein. (409 aa)
Srot_1910KEGG: rha:RHA1_ro02121 3-hydroxybutyryl-CoA dehydrogenase; PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; 3-hydroxyacyl-CoA dehydrogenase domain protein. (292 aa)
Srot_1926PFAM: Enoyl-CoA hydratase/isomerase; KEGG: mab:MAB_4431 enoyl-CoA hydratase/isomerase family protein; Belongs to the enoyl-CoA hydratase/isomerase family. (271 aa)
Srot_2079PFAM: Enoyl-CoA hydratase/isomerase; KEGG: nca:Noca_0288 enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. (256 aa)
Srot_2159KEGG: atc:AGR_C_5036 hypothetical protein. (149 aa)
Srot_2160KEGG: rop:ROP_52500 acetyl-CoA acyltransferase; TIGRFAM: acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (449 aa)
Srot_2162PFAM: MaoC domain protein dehydratase; KEGG: rha:RHA1_ro05198 MaoC-like dehydratase. (292 aa)
Srot_2163KEGG: nfa:nfa54690 hypothetical protein. (81 aa)
Srot_2410PFAM: Enoyl-CoA hydratase/isomerase; KEGG: cai:Caci_4435 enoyl-CoA hydratase/isomerase. (254 aa)
Srot_2414PFAM: acyl-CoA dehydrogenase domain protein; KEGG: mav:MAV_1091 putative acyl-CoA dehydrogenase. (382 aa)
Srot_2523PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; 3-hydroxyacyl-CoA dehydrogenase domain protein; KEGG: mab:MAB_0759c putative dehydrogenase (3- hydroxybutyryl-CoA dehydrogenase FadB). (286 aa)
Srot_2536PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; KEGG: svi:Svir_30240 short chain enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase. (719 aa)
Srot_2537KEGG: gbr:Gbro_4504 acetyl-CoA acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (402 aa)
Srot_2689PFAM: Enoyl-CoA hydratase/isomerase; KEGG: gbr:Gbro_1527 enoyl-CoA hydratase/isomerase. (336 aa)
Srot_2728PFAM: MaoC domain protein dehydratase; KEGG: nfa:nfa51180 hypothetical protein. (141 aa)
Srot_2729KEGG: nfa:nfa51180 hypothetical protein. (183 aa)
Srot_2730PFAM: MaoC domain protein dehydratase; KEGG: nfa:nfa51180 hypothetical protein. (142 aa)
Srot_2731PFAM: MaoC domain protein dehydratase; KEGG: rop:ROP_16610 beta-hydroxyacyl-[acyl-carrier- protein] dehydratase subunit HadA. (180 aa)
Srot_2824PFAM: Enoyl-CoA hydratase/isomerase; KEGG: mjl:Mjls_4812 enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. (242 aa)
Srot_2969PFAM: amino acid permease-associated region; KEGG: mab:MAB_3866c putative amino acid permease. (463 aa)
Srot_2970PFAM: acyl-CoA dehydrogenase domain protein; KEGG: rop:ROP_51610 acyl-CoA dehydrogenase. (386 aa)
Your Current Organism:
Segniliparus rotundus
NCBI taxonomy Id: 640132
Other names: S. rotundus DSM 44985, Segniliparus rotundus ATCC BAA-972, Segniliparus rotundus CIP 108378, Segniliparus rotundus DSM 44985, Segniliparus rotundus JCM 13578, Segniliparus rotundus str. DSM 44985, Segniliparus rotundus strain DSM 44985
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