STRINGSTRING
Srot_1254 Srot_1254 Srot_1255 Srot_1255 Srot_1477 Srot_1477 Srot_1478 Srot_1478 Srot_1479 Srot_1479 Srot_2519 Srot_2519
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Srot_1254PFAM: protein of unknown function DUF1707; KEGG: sco:SCO2893 hypothetical protein. (231 aa)
Srot_1255PFAM: protein of unknown function DUF1707; KEGG: sma:SAV_5183 hypothetical protein. (221 aa)
Srot_1477PFAM: ATPase associated with various cellular activities AAA_3; KEGG: rop:ROP_69980 hypothetical protein. (351 aa)
Srot_1478PFAM: protein of unknown function DUF58; KEGG: mab:MAB_2725c hypothetical protein. (310 aa)
Srot_1479Von Willebrand factor type A; KEGG: rha:RHA1_ro03133 hypothetical protein; PFAM: von Willebrand factor type A; SMART: von Willebrand factor type A. (343 aa)
Srot_2519Von Willebrand factor type A; KEGG: rha:RHA1_ro08556 hypothetical protein; PFAM: von Willebrand factor type A; SMART: von Willebrand factor type A. (343 aa)
Your Current Organism:
Segniliparus rotundus
NCBI taxonomy Id: 640132
Other names: S. rotundus DSM 44985, Segniliparus rotundus ATCC BAA-972, Segniliparus rotundus CIP 108378, Segniliparus rotundus DSM 44985, Segniliparus rotundus JCM 13578, Segniliparus rotundus str. DSM 44985, Segniliparus rotundus strain DSM 44985
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