STRINGSTRING
Srot_0743 Srot_0743 Srot_1369 Srot_1369 Srot_1370 Srot_1370 Srot_1371 Srot_1371 Srot_2493 Srot_2493
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Srot_0743Cell division FtsK/SpoIIIE; KEGG: mpa:MAP3780 hypothetical protein; PFAM: cell divisionFtsK/SpoIIIE; SMART: AAA ATPase. (1350 aa)
Srot_1369KEGG: nfa:nfa8240 hypothetical protein. (733 aa)
Srot_1370PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: mtb:TBMG_03931 membrane-anchored mycosin mycP1. (549 aa)
Srot_1371Secretion protein snm4; KEGG: nfa:nfa8270 hypothetical protein; TIGRFAM: secretion protein snm4; PFAM: protein of unknown function DUF571. (502 aa)
Srot_2493PFAM: protein of unknown function DUF690; KEGG: nfa:nfa8250 hypothetical protein. (557 aa)
Your Current Organism:
Segniliparus rotundus
NCBI taxonomy Id: 640132
Other names: S. rotundus DSM 44985, Segniliparus rotundus ATCC BAA-972, Segniliparus rotundus CIP 108378, Segniliparus rotundus DSM 44985, Segniliparus rotundus JCM 13578, Segniliparus rotundus str. DSM 44985, Segniliparus rotundus strain DSM 44985
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