STRINGSTRING
Srot_0630 Srot_0630 Srot_0632 Srot_0632 Srot_0633 Srot_0633 Srot_2667 Srot_2667 Srot_2673 Srot_2673
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Srot_0630Phosphomannomutase; KEGG: nfa:nfa46250 phosphomannomutase/phosphoglucomutase; PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase. (465 aa)
Srot_0632TIGRFAM: mannose-6-phosphate isomerase, class I; KEGG: mab:MAB_3601c mannose-6-phosphate isomerase ManA; PFAM: mannose-6-phosphate isomerase type I. (391 aa)
Srot_0633KEGG: mab:MAB_3600c putative cation transporter; TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein. (310 aa)
Srot_2667Glucose-1,6-bisphosphate synthase; KEGG: rop:ROP_63170 putative phosphoglucomutase; PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II. (558 aa)
Srot_2673PFAM: Nucleotidyl transferase; transferase hexapeptide repeat containing protein; KEGG: rer:RER_21490 mannose-1-phosphate guanylyltransferase. (366 aa)
Your Current Organism:
Segniliparus rotundus
NCBI taxonomy Id: 640132
Other names: S. rotundus DSM 44985, Segniliparus rotundus ATCC BAA-972, Segniliparus rotundus CIP 108378, Segniliparus rotundus DSM 44985, Segniliparus rotundus JCM 13578, Segniliparus rotundus str. DSM 44985, Segniliparus rotundus strain DSM 44985
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