STRINGSTRING
fgd fgd Srot_0176 Srot_0176 Srot_0194 Srot_0194 Srot_0245 Srot_0245 Srot_0542 Srot_0542 Srot_0765 Srot_0765 Srot_0766 Srot_0766 Srot_0767 Srot_0767 Srot_0768 Srot_0768 Srot_0769 Srot_0769 Srot_0770 Srot_0770 Srot_0771 Srot_0771 Srot_0772 Srot_0772 Srot_0773 Srot_0773 Srot_0814 Srot_0814 Srot_0816 Srot_0816 Srot_0817 Srot_0817 Srot_0835 Srot_0835 Srot_0954 Srot_0954 fbiD fbiD Srot_1046 Srot_1046 Srot_1047 Srot_1047 Srot_1048 Srot_1048 Srot_1049 Srot_1049 Srot_1119 Srot_1119 Srot_1120 Srot_1120 Srot_1121 Srot_1121 Srot_1122 Srot_1122 Srot_1123 Srot_1123 Srot_1124 Srot_1124 Srot_1125 Srot_1125 Srot_1136 Srot_1136 Srot_1240 Srot_1240 Srot_1241 Srot_1241 Srot_1242 Srot_1242 Srot_1358 Srot_1358 Srot_1508 Srot_1508 ligA ligA Srot_1579 Srot_1579 Srot_1580 Srot_1580 Srot_1582 Srot_1582 Srot_1618 Srot_1618 Srot_1621 Srot_1621 Srot_1622 Srot_1622 Srot_1623 Srot_1623 Srot_1624 Srot_1624 Srot_1625 Srot_1625 Srot_1626 Srot_1626 Srot_1627 Srot_1627 Srot_1900 Srot_1900 Srot_2011 Srot_2011 Srot_2012 Srot_2012 Srot_2168 Srot_2168 Srot_2169 Srot_2169 Srot_2177 Srot_2177 Srot_2178 Srot_2178 Srot_2179 Srot_2179 Srot_2208 Srot_2208 glnD glnD Srot_2254 Srot_2254 Srot_2255 Srot_2255 Srot_2257 Srot_2257 Srot_2258 Srot_2258 Srot_2259 Srot_2259 Srot_2260 Srot_2260 Srot_2261 Srot_2261 Srot_2455 Srot_2455 Srot_2595 Srot_2595 Srot_2596 Srot_2596 Srot_2597 Srot_2597 Srot_2598 Srot_2598 Srot_2599 Srot_2599 Srot_2670 Srot_2670 Srot_2671 Srot_2671 Srot_2739 Srot_2739 Srot_2769 Srot_2769 Srot_2836 Srot_2836 Srot_2837 Srot_2837 Srot_2838 Srot_2838 Srot_2856 Srot_2856 Srot_3027 Srot_3027 Srot_3028 Srot_3028 Srot_3029 Srot_3029 Srot_3030 Srot_3030 Srot_3031 Srot_3031 Srot_3032 Srot_3032 Srot_3033 Srot_3033 Srot_3035 Srot_3035 Srot_3036 Srot_3036
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
Your Input:
fgdF420-dependent oxidoreductase, G6PDH family; Catalyzes the coenzyme F420-dependent oxidation of glucose 6- phosphate (G6P) to 6-phosphogluconolactone. (335 aa)
Srot_0176KEGG: mjl:Mjls_2657 hypothetical protein. (271 aa)
Srot_0194PFAM: 2OG-Fe(II) oxygenase; KEGG: gbr:Gbro_4579 2OG-Fe(II) oxygenase; Belongs to the iron/ascorbate-dependent oxidoreductase family. (355 aa)
Srot_0245Putative F420-dependent enzyme; KEGG: gbr:Gbro_3771 PPOX class putative F420- dependent enzyme; TIGRFAM: putative F420-dependent enzyme; PFAM: pyridoxamine 5'-phosphate oxidase-related FMN- binding. (147 aa)
Srot_0542Putative F420-dependent oxidoreductase; KEGG: mab:MAB_0968c luciferase-like hypothetical protein; TIGRFAM: putative F420-dependent oxidoreductase; PFAM: Luciferase-like, subgroup. (301 aa)
Srot_0765PFAM: regulatory protein TetR; KEGG: mjl:Mjls_1371 TetR family transcriptional regulator. (216 aa)
Srot_0766PFAM: Rubredoxin-type Fe(Cys)4 protein; KEGG: mmi:MMAR_1293 rubredoxin RubB. (63 aa)
Srot_0767PFAM: Rubredoxin-type Fe(Cys)4 protein; KEGG: rer:RER_21630 rubredoxin; Belongs to the rubredoxin family. (59 aa)
Srot_0768KEGG: msm:MSMEG_1839 alkane 1-monooxygenase; PFAM: fatty acid desaturase. (417 aa)
Srot_0769KEGG: bcv:Bcav_1446 hypothetical protein. (244 aa)
Srot_0770KEGG: sma:SAV_5622 ABC transporter ATP-binding protein; PFAM: ABC transporter related; binding-protein- dependent transport systems inner membrane component; SMART: AAA ATPase. (682 aa)
Srot_0771PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sma:SAV_5620 ABC transporter permease protein. (297 aa)
Srot_0772PFAM: extracellular solute-binding protein family 5; KEGG: sma:SAV_5619 ABC transporter solute-bing protein. (514 aa)
Srot_0773Membrane protein AbrB duplication; KEGG: mva:Mvan_3161 putative ammonia monooxygenase; TIGRFAM: membrane protein AbrB duplication; PFAM: putative ammonia monooxygenase. (443 aa)
Srot_0814PFAM: Protein of unknown function DUF2236; KEGG: svi:Svir_20310 hypothetical protein. (293 aa)
Srot_0816PFAM: RDD domain containing protein; KEGG: gbr:Gbro_3079 RDD domain containing protein. (133 aa)
Srot_0817PFAM: major facilitator superfamily MFS_1; KEGG: rha:RHA1_ro04330 major facilitator transporter. (460 aa)
Srot_0835TIGRFAM: 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase, CofH subunit; 7,8-didemethyl-8-hydroxy-5- deazariboflavin synthase, CofG subunit; PFAM: Radical SAM domain protein; KEGG: rha:RHA1_ro05944 FO synthase; SMART: Elongator protein 3/MiaB/NifB. (841 aa)
Srot_0954PFAM: protein of unknown function DUF75; KEGG: nfa:nfa37830 hypothetical protein. (313 aa)
fbiD2-phospho-L-lactate guanylyltransferase CofC; Guanylyltransferase that catalyzes the activation of phosphoenolpyruvate (PEP) as enolpyruvoyl-2-diphospho-5'-guanosine, via the condensation of PEP with GTP. It is involved in the biosynthesis of coenzyme F420, a hydride carrier cofactor. (236 aa)
Srot_1046PFAM: extracellular solute-binding protein family 5; KEGG: rha:RHA1_ro05349 ABC oligopeptide transporter, permease component. (560 aa)
Srot_1047TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: mbt:JTY_1315 putative oligopeptide-transport ATP-binding protein ABC transporter; SMART: AAA ATPase; Belongs to the ABC transporter superfamily. (623 aa)
Srot_1048PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rop:ROP_54510 putative ABC transporter permease protein. (299 aa)
Srot_1049PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rha:RHA1_ro05352 ABC oligopeptide transporter, permease component. (325 aa)
Srot_1119PFAM: extracellular solute-binding protein family 5; KEGG: mpa:MAP0409 hypothetical protein. (563 aa)
Srot_1120PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rop:ROP_42440 putative ABC transporter permease protein. (309 aa)
Srot_1121PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rha:RHA1_ro04335 ABC peptide transporter, permease component. (303 aa)
Srot_1122ABC transporter related protein; KEGG: mbt:JTY_3722 putative dipeptide-transport ATP- binding protein ABC transporter; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily. (548 aa)
Srot_1123KEGG: mva:Mvan_5424 hypothetical protein. (234 aa)
Srot_1124PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: rer:RER_14090 hypothetical protein. (388 aa)
Srot_1125PFAM: acyltransferase 3; KEGG: svi:Svir_23340 predicted acyltransferase. (736 aa)
Srot_1136KEGG: mab:MAB_3748 putative luciferase-like oxidoreductase; TIGRFAM: putative F420-dependent oxidoreductase; PFAM: Luciferase-like, subgroup. (345 aa)
Srot_1240PFAM: regulatory protein TetR; KEGG: rha:RHA1_ro04179 transcriptional regulator. (192 aa)
Srot_1241KEGG: mab:MAB_0355 ammonium transporter; TIGRFAM: ammonium transporter; PFAM: ammonium transporter. (437 aa)
Srot_1242PFAM: protein of unknown function DUF328; KEGG: nfa:nfa40740 hypothetical protein; Belongs to the UPF0246 family. (247 aa)
Srot_1358KEGG: cdi:DIP1763 hypothetical protein. (351 aa)
Srot_1508Alkanesulfonate monooxygenase; KEGG: mmi:MMAR_4200 F420-dependent glucose-6- phosphate dehydrogenase Fgd2. (387 aa)
ligADNA ligase, NAD-dependent; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA; Belongs to the NAD-dependent DNA ligase family. LigA subfamily. (690 aa)
Srot_15795,10-methylenetetrahydromethanopterin reductase; KEGG: kra:Krad_4268 luciferase family protein; PFAM: Luciferase-like, subgroup. (341 aa)
Srot_1580PFAM: DoxX family protein; KEGG: scl:sce1869 hypothetical protein. (157 aa)
Srot_1582KEGG: msm:MSMEG_6454 hypothetical protein; TIGRFAM: putative F420-dependent oxidoreductase; PFAM: Luciferase-like, subgroup. (280 aa)
Srot_1618KEGG: hmo:HM1_1255 hypothetical protein. (309 aa)
Srot_1621KEGG: nca:Noca_4575 extracellular solute-binding protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; ionotropic glutamate receptor. (285 aa)
Srot_1622KEGG: sgr:SGR_6812 putative ABC transporter permease protein; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component. (279 aa)
Srot_1623KEGG: ami:Amir_6886 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase. (247 aa)
Srot_1624PFAM: NMT1/THI5 like domain protein; KEGG: msm:MSMEG_1159 ABC transporter component A. (348 aa)
Srot_1625KEGG: rop:ROP_50110 putative ABC transporter ATP- binding protein; PFAM: ABC transporter related; SMART: AAA ATPase. (265 aa)
Srot_1626PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: msm:MSMEG_1161 taurine transport system permease protein TauC. (291 aa)
Srot_1627KEGG: svi:Svir_18160 probable taurine catabolism dioxygenase; PFAM: Taurine catabolism dioxygenase TauD/TfdA. (313 aa)
Srot_1900PFAM: peptidase M48 Ste24p; KEGG: mab:MAB_1573c hypothetical protein. (389 aa)
Srot_2011KEGG: mab:MAB_4526 hypothetical protein. (134 aa)
Srot_2012Hypothetical protein; KEGG: rde:RD1_4147 N-acetyl-anhydromuramyl-L- alanine amidase, putative. (253 aa)
Srot_2168Putative F420-dependent oxidoreductase; KEGG: rha:RHA1_ro02495 5,10- methylenetetrahydromethanopterin reductase; TIGRFAM: putative F420-dependent oxidoreductase; PFAM: Luciferase-like, subgroup. (342 aa)
Srot_2169PFAM: amino acid permease-associated region; KEGG: ach:Achl_3893 amino acid permease-associated region. (475 aa)
Srot_2177PFAM: alpha/beta hydrolase fold; KEGG: pfs:PFLU3636 putative oxidoreductase. (315 aa)
Srot_2178Putative F420-dependent oxidoreductase; KEGG: rha:RHA1_ro02495 5,10- methylenetetrahydromethanopterin reductase; TIGRFAM: putative F420-dependent oxidoreductase; PFAM: Luciferase-like, subgroup. (323 aa)
Srot_2179PFAM: Antibiotic biosynthesis monooxygenase; KEGG: rer:RER_06640 hypothetical protein. (99 aa)
Srot_2208KEGG: nfa:nfa55380 hypothetical protein. (291 aa)
glnDUTP-GlnB uridylyltransferase, GlnD; Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen assimilation and metabolism. (800 aa)
Srot_2254PFAM: nitrogen regulatory protein P-II; KEGG: rop:ROP_65830 nitrogen regulatory protein PII; Belongs to the P(II) protein family. (112 aa)
Srot_2255KEGG: mab:MAB_3240c ammonium transporter; TIGRFAM: ammonium transporter; PFAM: ammonium transporter. (442 aa)
Srot_2257KEGG: rsa:RSal33209_3329 hypothetical protein. (148 aa)
Srot_2258KEGG: rsa:RSal33209_3329 hypothetical protein. (165 aa)
Srot_2259Hypothetical protein; KEGG: GJ18281 gene product from transcript GJ18281- RA. (139 aa)
Srot_2260PFAM: Domain of unknown function DUF1990; KEGG: mva:Mvan_2554 hypothetical protein. (210 aa)
Srot_2261KEGG: mmi:MMAR_3543 hypothetical protein. (322 aa)
Srot_2455Putative F420-dependent enzyme; KEGG: msm:MSMEG_3380 pyridoxamine 5'-phosphate oxidase-related, FMN-binding; TIGRFAM: putative F420-dependent enzyme; PFAM: pyridoxamine 5'-phosphate oxidase-related FMN- binding. (129 aa)
Srot_2595KEGG: cms:CMS_2924 hypothetical protein. (173 aa)
Srot_2596KEGG: hau:Haur_3054 hypothetical protein. (173 aa)
Srot_2597PFAM: Acyl-CoA dehydrogenase type 2 domain; acyl- CoA dehydrogenase domain protein; KEGG: rha:RHA1_ro02883 acyl-CoA ligase. (447 aa)
Srot_2598KEGG: mjl:Mjls_0897 putative monooxygenase. (473 aa)
Srot_2599PFAM: Methylated-DNA-[protein]-cysteine S- methyltransferase DNA binding; KEGG: mab:MAB_3377 hypothetical protein. (262 aa)
Srot_2670LPPG domain protein containing protein; KEGG: rop:ROP_63740 LPPG--FO 2-phopspho-L-lactate transferase; TIGRFAM: LPPG domain protein containing protein; PFAM: protein of unknown function UPF0052 and CofD. (324 aa)
Srot_2671KEGG: sen:SACE_6467 F420-0--gamma-glutamyl ligase; TIGRFAM: F420 biosynthesis protein FbiB, C-terminal domain; F420-dependent oxidoreductase; PFAM: protein of unknown function DUF129; nitroreductase. (445 aa)
Srot_2739KEGG: nfa:nfa15760 hypothetical protein. (142 aa)
Srot_2769KEGG: rop:ROP_39410 putative oxidoreductase; TIGRFAM: putative F420-dependent oxidoreductase; PFAM: Luciferase-like, subgroup. (345 aa)
Srot_2836PFAM: major facilitator superfamily MFS_1; KEGG: rha:RHA1_ro06364 major facilitator superfamily cyanate symporter. (434 aa)
Srot_2837GntR domain protein; KEGG: rha:RHA1_ro06363 GntR family transcriptional regulator; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH. (235 aa)
Srot_2838KEGG: mab:MAB_3016c hypothetical protein. (279 aa)
Srot_2856PFAM: flavin reductase domain protein FMN-binding; KEGG: fal:FRAAL6186 putative oxidoreductase. (168 aa)
Srot_3027KEGG: bcv:Bcav_1120 ABC transporter related; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase. (265 aa)
Srot_3028KEGG: mab:MAB_0722 putative oligopeptide ABC transporter, ATP-binding protein; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase. (490 aa)
Srot_3029PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mab:MAB_0721 oligopeptide ABC transporter, permease protein. (382 aa)
Srot_3030PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mab:MAB_0720 oligopeptide ABC transporter, permease protein. (352 aa)
Srot_3031PFAM: extracellular solute-binding protein family 5; KEGG: mab:MAB_0719 putative oligopeptide ABC transporter, solute-binding protein. (532 aa)
Srot_3032Hypothetical protein; KEGG: aas:Aasi_0176 methionine aminopeptidase, type I. (161 aa)
Srot_3033Hypothetical protein; KEGG: fra:Francci3_1911 ErfK/YbiS/YcfS/YnhG. (171 aa)
Srot_3035KEGG: sco:SCO7727 MarR family regulatory protein; PFAM: regulatory protein MarR; SMART: regulatory protein MarR. (192 aa)
Srot_3036PFAM: Pirin domain protein; KEGG: mva:Mvan_0099 pirin domain-containing protein; Belongs to the pirin family. (322 aa)
Your Current Organism:
Segniliparus rotundus
NCBI taxonomy Id: 640132
Other names: S. rotundus DSM 44985, Segniliparus rotundus ATCC BAA-972, Segniliparus rotundus CIP 108378, Segniliparus rotundus DSM 44985, Segniliparus rotundus JCM 13578, Segniliparus rotundus str. DSM 44985, Segniliparus rotundus strain DSM 44985
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