STRINGSTRING
Srot_0014 Srot_0014 Srot_3050 Srot_3050 Srot_2147 Srot_2147 Srot_1829 Srot_1829 Srot_1284 Srot_1284 Srot_0015 Srot_0015
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Srot_0014KEGG: sen:SACE_7384 thioredoxin reductase; TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase. (323 aa)
Srot_3050PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: nfa:nfa5960 putative thioredoxin. (138 aa)
Srot_2147KEGG: mab:MAB_3512 putative glutaredoxin-like protein; TIGRFAM: glutaredoxin-like protein; PFAM: glutaredoxin. (88 aa)
Srot_1829PFAM: Thioredoxin domain; KEGG: rop:ROP_11650 putative thioredoxin. (311 aa)
Srot_1284KEGG: mva:Mvan_2040 glutaredoxin-like protein NrdH; TIGRFAM: glutaredoxin-like protein NrdH; PFAM: glutaredoxin. (88 aa)
Srot_0015Thioredoxin; KEGG: mjl:Mjls_5779 thioredoxin; TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; Belongs to the thioredoxin family. (109 aa)
Your Current Organism:
Segniliparus rotundus
NCBI taxonomy Id: 640132
Other names: S. rotundus DSM 44985, Segniliparus rotundus ATCC BAA-972, Segniliparus rotundus CIP 108378, Segniliparus rotundus DSM 44985, Segniliparus rotundus JCM 13578, Segniliparus rotundus str. DSM 44985, Segniliparus rotundus strain DSM 44985
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