STRINGSTRING
Srot_0842 Srot_0842 Srot_0843 Srot_0843 Srot_0844 Srot_0844 cysA cysA crcB crcB crcB-2 crcB-2 Srot_1107 Srot_1107 Srot_1108 Srot_1108 Srot_2835 Srot_2835 Srot_0093 Srot_0093 Srot_0115 Srot_0115 Srot_0264 Srot_0264 Srot_0265 Srot_0265 Srot_0324 Srot_0324 Srot_0603 Srot_0603
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Srot_0842KEGG: gbr:Gbro_3174 sulfate ABC transporter, periplasmic sulfate-binding protein; TIGRFAM: sulfate ABC transporter, periplasmic sulfate-binding protein; PFAM: extracellular solute-binding protein family 1. (335 aa)
Srot_0843Sulfate ABC transporter, inner membrane subunit CysT; Part of the ABC transporter complex (TC 3.A.1.6.1) involved in sulfate/thiosulfate import. (277 aa)
Srot_0844KEGG: gbr:Gbro_3172 sulfate ABC transporter, inner membrane subunit CysW; TIGRFAM: sulfate ABC transporter, inner membrane subunit CysW; sulfate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component. (269 aa)
cysASulfate ABC transporter, ATPase subunit; Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system. (330 aa)
crcBCamphor resistance CrcB protein; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family. (121 aa)
crcB-2Camphor resistance CrcB protein; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family. (149 aa)
Srot_1107PFAM: Anion-transporting ATPase; KEGG: rha:RHA1_ro04317 arsenate (2+)-transporting ATPase. (375 aa)
Srot_1108PFAM: Anion-transporting ATPase; KEGG: mgi:Mflv_1368 anion-transporting ATPase. (358 aa)
Srot_2835PFAM: major facilitator superfamily MFS_1; KEGG: rop:ROP_64260 putative nitrite/nitrate transporter. (467 aa)
Srot_0093PFAM: Arsenical pump membrane protein; KEGG: sma:SAV_7477 membrane efflux protein. (424 aa)
Srot_0115KEGG: mgi:Mflv_1665 phosphate uptake regulator, PhoU; TIGRFAM: phosphate transport system regulatory protein PhoU; PFAM: PhoU family protein. (216 aa)
Srot_0264KEGG: mva:Mvan_2538 molybdenum ABC transporter, periplasmic molybdate-binding protein; TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; PFAM: extracellular solute-binding protein family 1. (282 aa)
Srot_0265NifC-like ABC-type porter; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. (260 aa)
Srot_0324ABC-type molybdate transport system periplasmic component-like protein; KEGG: mno:Mnod_2760 extracellular solute-binding protein family 1. (306 aa)
Srot_0603PFAM: phosphate transporter; KEGG: rer:RER_36310 inorganic phosphate transporter. (422 aa)
Your Current Organism:
Segniliparus rotundus
NCBI taxonomy Id: 640132
Other names: S. rotundus DSM 44985, Segniliparus rotundus ATCC BAA-972, Segniliparus rotundus CIP 108378, Segniliparus rotundus DSM 44985, Segniliparus rotundus JCM 13578, Segniliparus rotundus str. DSM 44985, Segniliparus rotundus strain DSM 44985
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