STRINGSTRING
Srot_2976 Srot_2976 Srot_2963 Srot_2963 Srot_2567 Srot_2567 Srot_2455 Srot_2455 Srot_2430 Srot_2430 Srot_1984 Srot_1984 Srot_1829 Srot_1829 Srot_1480 Srot_1480 Srot_1451 Srot_1451 Srot_1315 Srot_1315 Srot_1284 Srot_1284 Srot_1247 Srot_1247 Srot_1045 Srot_1045 Srot_0760 Srot_0760 Srot_0739 Srot_0739 Srot_0458 Srot_0458 Srot_0245 Srot_0245 Srot_0141 Srot_0141 Srot_0115 Srot_0115 Srot_0015 Srot_0015
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Srot_2976KEGG: gbr:Gbro_2130 mycothione reductase; TIGRFAM: mycothione reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region. (461 aa)
Srot_2963Ferritin Dps family protein; Iron-storage protein. (193 aa)
Srot_2567PFAM: protein of unknown function DUF152; KEGG: nml:Namu_3797 protein of unknown function DUF152; Belongs to the multicopper oxidase YfiH/RL5 family. (215 aa)
Srot_2455Putative F420-dependent enzyme; KEGG: msm:MSMEG_3380 pyridoxamine 5'-phosphate oxidase-related, FMN-binding; TIGRFAM: putative F420-dependent enzyme; PFAM: pyridoxamine 5'-phosphate oxidase-related FMN- binding. (129 aa)
Srot_2430KEGG: mab:MAB_2262c ABC transporter ATP-binding protein; PFAM: ABC transporter related; FAD-binding 9 siderophore-interacting domain protein; Siderophore- interacting protein; ABC transporter transmembrane region; SMART: AAA ATPase. (866 aa)
Srot_1984KEGG: mab:MAB_4127c dihydrolipoamide dehydrogenase; TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region. (466 aa)
Srot_1829PFAM: Thioredoxin domain; KEGG: rop:ROP_11650 putative thioredoxin. (311 aa)
Srot_1480PFAM: SNARE associated Golgi protein; KEGG: gbr:Gbro_2418 SNARE associated Golgi protein- like protein. (233 aa)
Srot_1451Putative F420-dependent enzyme; KEGG: mpa:MAP2229 hypothetical protein; TIGRFAM: putative F420-dependent enzyme; PFAM: pyridoxamine 5'-phosphate oxidase-related FMN- binding. (143 aa)
Srot_1315PFAM: Siderophore-interacting protein; FAD-binding 9 siderophore-interacting domain protein; KEGG: rer:RER_17020 siderophore-interacting protein. (273 aa)
Srot_1284KEGG: mva:Mvan_2040 glutaredoxin-like protein NrdH; TIGRFAM: glutaredoxin-like protein NrdH; PFAM: glutaredoxin. (88 aa)
Srot_1247TIGRFAM: ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC; PFAM: ABC transporter related; KEGG: rer:RER_48150 ABC transporter permease/ATP- binding protein CydC; SMART: AAA ATPase. (553 aa)
Srot_1045PFAM: Ferritin Dps family protein; KEGG: gbr:Gbro_0470 ferritin Dps family protein; Belongs to the Dps family. (157 aa)
Srot_0760PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: mjl:Mjls_1276 flavoprotein disulfide reductase. (468 aa)
Srot_0739PFAM: AMP-dependent synthetase and ligase; KEGG: rop:ROP_23290 2,3-dihydroxybenzoate-AMP ligase. (505 aa)
Srot_0458PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: nfa:nfa18570 hypothetical protein. (155 aa)
Srot_0245Putative F420-dependent enzyme; KEGG: gbr:Gbro_3771 PPOX class putative F420- dependent enzyme; TIGRFAM: putative F420-dependent enzyme; PFAM: pyridoxamine 5'-phosphate oxidase-related FMN- binding. (147 aa)
Srot_0141PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: mab:MAB_3032 soluble pyridine nucleotide transhydrogenase. (473 aa)
Srot_0115KEGG: mgi:Mflv_1665 phosphate uptake regulator, PhoU; TIGRFAM: phosphate transport system regulatory protein PhoU; PFAM: PhoU family protein. (216 aa)
Srot_0015Thioredoxin; KEGG: mjl:Mjls_5779 thioredoxin; TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; Belongs to the thioredoxin family. (109 aa)
Your Current Organism:
Segniliparus rotundus
NCBI taxonomy Id: 640132
Other names: S. rotundus DSM 44985, Segniliparus rotundus ATCC BAA-972, Segniliparus rotundus CIP 108378, Segniliparus rotundus DSM 44985, Segniliparus rotundus JCM 13578, Segniliparus rotundus str. DSM 44985, Segniliparus rotundus strain DSM 44985
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