STRINGSTRING
Srot_2516 Srot_2516 Srot_2958 Srot_2958 Srot_2624 Srot_2624 Srot_2559 Srot_2559 Srot_2472 Srot_2472 Srot_2457 Srot_2457 Srot_2247 Srot_2247 Srot_1845 Srot_1845 Srot_1711 Srot_1711 Srot_1694 Srot_1694 ahpD ahpD Srot_1574 Srot_1574 Srot_1484 Srot_1484 Srot_1464 Srot_1464 Srot_1288 Srot_1288 Srot_0872 Srot_0872 Srot_0830 Srot_0830 Srot_0824 Srot_0824 Srot_0763 Srot_0763 Srot_0517 Srot_0517 Srot_0472 Srot_0472 Srot_0458 Srot_0458 Srot_0323 Srot_0323 Srot_0192 Srot_0192 Srot_0191 Srot_0191 Srot_0127 Srot_0127 Srot_0014 Srot_0014
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Srot_2516KEGG: mav:MAV_0719 putative esterase superfamily protein. (311 aa)
Srot_2958Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. (203 aa)
Srot_2624Catalase; KEGG: mmi:MMAR_5217 catalase KatE; PFAM: Catalase related subgroup; Catalase domain protein. (486 aa)
Srot_2559Catalase related subgroup; Has an organic peroxide-dependent peroxidase activity. Belongs to the catalase family. (352 aa)
Srot_2472KEGG: rer:RER_54700 aryl-alcohol dehydrogenase AdhC; TIGRFAM: mycothiol-dependent formaldehyde dehydrogenase; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein. (361 aa)
Srot_2457PFAM: Carboxymuconolactone decarboxylase; KEGG: son:SO_0083 carboxymuconolactone decarboxylase family protein. (131 aa)
Srot_2247PFAM: Carboxymuconolactone decarboxylase; KEGG: rha:RHA1_ro02133 hypothetical protein. (186 aa)
Srot_1845Hypothetical protein; KEGG: mab:MAB_2246 thiol-specific antioxidant related protein/peroxidoxin BcpB. (218 aa)
Srot_1711KEGG: cai:Caci_7482 Dyp-type peroxidase family; TIGRFAM: Dyp-type peroxidase family; PFAM: Dyp-type peroxidase. (401 aa)
Srot_1694PFAM: Redoxin domain protein; KEGG: mva:Mvan_0866 redoxin domain-containing protein. (191 aa)
ahpDAlkylhydroperoxidase, AhpD family; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. (174 aa)
Srot_1574PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: nfa:nfa37890 putative alkylhydroperoxide reductase. (197 aa)
Srot_1484PFAM: alpha/beta hydrolase fold; KEGG: rer:RER_15910 hydrolase. (349 aa)
Srot_1464PFAM: putative esterase; KEGG: mab:MAB_2451c hypothetical protein. (468 aa)
Srot_1288PFAM: alpha/beta hydrolase fold; KEGG: rop:ROP_18200 putative hydrolase. (340 aa)
Srot_0872PFAM: OsmC family protein; KEGG: mpa:MAP2992c hypothetical protein. (140 aa)
Srot_0830PFAM: putative esterase; KEGG: rer:RER_14670 mycolyltransferase. (320 aa)
Srot_0824PFAM: superoxide dismutase copper/zinc binding; KEGG: rer:RER_14950 superoxide dismutase. (249 aa)
Srot_0763PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: mjl:Mjls_3657 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen. (157 aa)
Srot_0517Dyp-type peroxidase family; Involved in the recovery of exogenous heme iron. Extracts iron from heme while preserving the tetrapyrrol ring intact. Belongs to the DyP-type peroxidase family. (424 aa)
Srot_0472PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: mab:MAB_0983c zinc-containing alcohol dehydrogenase. (379 aa)
Srot_0458PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: nfa:nfa18570 hypothetical protein. (155 aa)
Srot_0323PFAM: Redoxin domain protein; KEGG: mav:MAV_3729 15 kDa antigen. (170 aa)
Srot_0192Peroxiredoxin; KEGG: mjl:Mjls_4940 glutathione peroxidase; PFAM: glutathione peroxidase; Belongs to the glutathione peroxidase family. (166 aa)
Srot_0191PFAM: Carboxymuconolactone decarboxylase; KEGG: rer:RER_15470 hypothetical protein. (180 aa)
Srot_0127KEGG: nfa:nfa12230 putative dehydrogenase; TIGRFAM: mycothiol-dependent formaldehyde dehydrogenase; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein. (368 aa)
Srot_0014KEGG: sen:SACE_7384 thioredoxin reductase; TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase. (323 aa)
Your Current Organism:
Segniliparus rotundus
NCBI taxonomy Id: 640132
Other names: S. rotundus DSM 44985, Segniliparus rotundus ATCC BAA-972, Segniliparus rotundus CIP 108378, Segniliparus rotundus DSM 44985, Segniliparus rotundus JCM 13578, Segniliparus rotundus str. DSM 44985, Segniliparus rotundus strain DSM 44985
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