STRINGSTRING
Srot_0516 Srot_0516 Srot_0515 Srot_0515 Srot_1712 Srot_1712
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Srot_0516PFAM: Peptidase M75, Imelysin; KEGG: mva:Mvan_4774 hypothetical protein. (384 aa)
Srot_0515PFAM: iron permease FTR1; KEGG: rop:ROP_58390 hypothetical membrane protein. (282 aa)
Srot_1712PFAM: Peptidase M75, Imelysin; KEGG: cai:Caci_7481 iron permease FTR1. (368 aa)
Your Current Organism:
Segniliparus rotundus
NCBI taxonomy Id: 640132
Other names: S. rotundus DSM 44985, Segniliparus rotundus ATCC BAA-972, Segniliparus rotundus CIP 108378, Segniliparus rotundus DSM 44985, Segniliparus rotundus JCM 13578, Segniliparus rotundus str. DSM 44985, Segniliparus rotundus strain DSM 44985
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