STRINGSTRING
Srot_1126 Srot_1126 glgB glgB glgE glgE Srot_1385 Srot_1385 Srot_1277 Srot_1277 Srot_1127 Srot_1127
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Known Interactions
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experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
Your Input:
Srot_1126TIGRFAM: malto-oligosyltrehalose synthase; PFAM: alpha amylase catalytic region; KEGG: rer:RER_35070 malto-oligosyltrehalose synthase; SMART: alpha amylase catalytic sub domain. (831 aa)
glgB1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily. (739 aa)
glgEAlpha amylase catalytic sub domain protein; Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1->4)-glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB. (668 aa)
Srot_1385Alpha amylase catalytic region; KEGG: rha:RHA1_ro01389 alpha-glucosidase; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain. (546 aa)
Srot_1277TIGRFAM: malto-oligosyltrehalose trehalohydrolase; PFAM: alpha amylase catalytic region; glycoside hydrolase family 13 domain protein; KEGG: nfa:nfa18050 putative glycosyl hydrolase; SMART: alpha amylase catalytic sub domain. (575 aa)
Srot_1127TIGRFAM: glycogen debranching enzyme GlgX; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; KEGG: nfa:nfa18150 putative glycosyl hydrolase; SMART: alpha amylase catalytic sub domain; Belongs to the glycosyl hydrolase 13 family. (722 aa)
Your Current Organism:
Segniliparus rotundus
NCBI taxonomy Id: 640132
Other names: S. rotundus DSM 44985, Segniliparus rotundus ATCC BAA-972, Segniliparus rotundus CIP 108378, Segniliparus rotundus DSM 44985, Segniliparus rotundus JCM 13578, Segniliparus rotundus str. DSM 44985, Segniliparus rotundus strain DSM 44985
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