STRINGSTRING
Srot_0102 Srot_0102 Srot_0265 Srot_0265 Srot_0770 Srot_0770 Srot_0771 Srot_0771 Srot_0843 Srot_0843 Srot_0844 Srot_0844 Srot_1048 Srot_1048 Srot_1049 Srot_1049 Srot_1120 Srot_1120 Srot_1121 Srot_1121 Srot_1622 Srot_1622 Srot_1626 Srot_1626 Srot_1927 Srot_1927 Srot_1928 Srot_1928 Srot_2082 Srot_2082 Srot_2083 Srot_2083 Srot_2613 Srot_2613 Srot_2614 Srot_2614 Srot_3029 Srot_3029 Srot_3030 Srot_3030
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Srot_0102PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mab:MAB_2802c ABC transporter permease. (230 aa)
Srot_0265NifC-like ABC-type porter; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. (260 aa)
Srot_0770KEGG: sma:SAV_5622 ABC transporter ATP-binding protein; PFAM: ABC transporter related; binding-protein- dependent transport systems inner membrane component; SMART: AAA ATPase. (682 aa)
Srot_0771PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sma:SAV_5620 ABC transporter permease protein. (297 aa)
Srot_0843Sulfate ABC transporter, inner membrane subunit CysT; Part of the ABC transporter complex (TC 3.A.1.6.1) involved in sulfate/thiosulfate import. (277 aa)
Srot_0844KEGG: gbr:Gbro_3172 sulfate ABC transporter, inner membrane subunit CysW; TIGRFAM: sulfate ABC transporter, inner membrane subunit CysW; sulfate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component. (269 aa)
Srot_1048PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rop:ROP_54510 putative ABC transporter permease protein. (299 aa)
Srot_1049PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rha:RHA1_ro05352 ABC oligopeptide transporter, permease component. (325 aa)
Srot_1120PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rop:ROP_42440 putative ABC transporter permease protein. (309 aa)
Srot_1121PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rha:RHA1_ro04335 ABC peptide transporter, permease component. (303 aa)
Srot_1622KEGG: sgr:SGR_6812 putative ABC transporter permease protein; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component. (279 aa)
Srot_1626PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: msm:MSMEG_1161 taurine transport system permease protein TauC. (291 aa)
Srot_1927PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mab:MAB_1717c sugar ABC transporter, permease protein. (292 aa)
Srot_1928PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mmi:MMAR_3618 sugar-transport integral membrane protein ABC transporter UspB. (275 aa)
Srot_2082PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rop:ROP_60500 putative ABC transporter permease protein. (277 aa)
Srot_2083PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rop:ROP_60490 putative ABC transporter permease protein. (287 aa)
Srot_2613PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rha:RHA1_ro06002 ABC amino acid transporter, permease component. (213 aa)
Srot_2614PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mjl:Mjls_5345 binding-protein-dependent transport systems inner membrane component. (225 aa)
Srot_3029PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mab:MAB_0721 oligopeptide ABC transporter, permease protein. (382 aa)
Srot_3030PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mab:MAB_0720 oligopeptide ABC transporter, permease protein. (352 aa)
Your Current Organism:
Segniliparus rotundus
NCBI taxonomy Id: 640132
Other names: S. rotundus DSM 44985, Segniliparus rotundus ATCC BAA-972, Segniliparus rotundus CIP 108378, Segniliparus rotundus DSM 44985, Segniliparus rotundus JCM 13578, Segniliparus rotundus str. DSM 44985, Segniliparus rotundus strain DSM 44985
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